Protein–RNA interactions for Protein: Q9D8B3

Chmp4b, Charged multivesicular body protein 4b, mousemouse

Known RBP Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp4bQ9D8B3 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Chmp4bQ9D8B3 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Chmp4bQ9D8B3 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Chmp4bQ9D8B3 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
Chmp4bQ9D8B3 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Chmp4bQ9D8B3 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC16.31■□□□□ 0.2
Chmp4bQ9D8B3 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Chmp4bQ9D8B3 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Chmp4bQ9D8B3 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Chmp4bQ9D8B3 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC16.31■□□□□ 0.2
Chmp4bQ9D8B3 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Chmp4bQ9D8B3 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Chmp4bQ9D8B3 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Chmp4bQ9D8B3 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Chmp4bQ9D8B3 Gm27486-201ENSMUST00000184923 80 ntBASIC16.31■□□□□ 0.2
Chmp4bQ9D8B3 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC16.31■□□□□ 0.2
Chmp4bQ9D8B3 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC16.31■□□□□ 0.2
Chmp4bQ9D8B3 Arhgef33-209ENSMUST00000225223 714 ntBASIC16.31■□□□□ 0.2
Chmp4bQ9D8B3 Gm10012-201ENSMUST00000078252 192 ntBASIC16.31■□□□□ 0.2
Chmp4bQ9D8B3 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Chmp4bQ9D8B3 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Chmp4bQ9D8B3 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Chmp4bQ9D8B3 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Chmp4bQ9D8B3 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Chmp4bQ9D8B3 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Chmp4bQ9D8B3 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Chmp4bQ9D8B3 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Chmp4bQ9D8B3 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Chmp4bQ9D8B3 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Chmp4bQ9D8B3 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Chmp4bQ9D8B3 Gm45053-201ENSMUST00000206112 2499 ntBASIC16.3■□□□□ 0.2
Chmp4bQ9D8B3 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Chmp4bQ9D8B3 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Chmp4bQ9D8B3 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Chmp4bQ9D8B3 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Chmp4bQ9D8B3 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Chmp4bQ9D8B3 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Chmp4bQ9D8B3 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Chmp4bQ9D8B3 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC16.3■□□□□ 0.2
Chmp4bQ9D8B3 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Chmp4bQ9D8B3 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Chmp4bQ9D8B3 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Chmp4bQ9D8B3 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Chmp4bQ9D8B3 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Chmp4bQ9D8B3 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Chmp4bQ9D8B3 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Chmp4bQ9D8B3 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC16.3■□□□□ 0.2
Chmp4bQ9D8B3 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Chmp4bQ9D8B3 Gm14921-201ENSMUST00000118643 908 ntBASIC16.3■□□□□ 0.2
Chmp4bQ9D8B3 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Chmp4bQ9D8B3 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Chmp4bQ9D8B3 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Chmp4bQ9D8B3 H2-Pa-201ENSMUST00000182803 626 ntBASIC16.3■□□□□ 0.2
Chmp4bQ9D8B3 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Chmp4bQ9D8B3 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC16.3■□□□□ 0.2
Chmp4bQ9D8B3 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Chmp4bQ9D8B3 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC16.3■□□□□ 0.2
Chmp4bQ9D8B3 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
Chmp4bQ9D8B3 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Chmp4bQ9D8B3 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Chmp4bQ9D8B3 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Chmp4bQ9D8B3 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Chmp4bQ9D8B3 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC16.29■□□□□ 0.2
Chmp4bQ9D8B3 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Chmp4bQ9D8B3 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Chmp4bQ9D8B3 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Chmp4bQ9D8B3 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC16.29■□□□□ 0.2
Chmp4bQ9D8B3 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Chmp4bQ9D8B3 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Chmp4bQ9D8B3 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Chmp4bQ9D8B3 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Chmp4bQ9D8B3 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
Chmp4bQ9D8B3 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Chmp4bQ9D8B3 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Chmp4bQ9D8B3 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Chmp4bQ9D8B3 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC16.29■□□□□ 0.2
Chmp4bQ9D8B3 Gm13813-201ENSMUST00000120998 787 ntBASIC16.29■□□□□ 0.2
Chmp4bQ9D8B3 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC16.29■□□□□ 0.2
Chmp4bQ9D8B3 Gm24196-201ENSMUST00000179161 110 ntBASIC16.29■□□□□ 0.2
Chmp4bQ9D8B3 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC16.29■□□□□ 0.2
Chmp4bQ9D8B3 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC16.29■□□□□ 0.2
Chmp4bQ9D8B3 Gm43416-201ENSMUST00000201916 1015 ntBASIC16.29■□□□□ 0.2
Chmp4bQ9D8B3 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC16.29■□□□□ 0.2
Chmp4bQ9D8B3 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Chmp4bQ9D8B3 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Chmp4bQ9D8B3 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Chmp4bQ9D8B3 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Chmp4bQ9D8B3 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Chmp4bQ9D8B3 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Chmp4bQ9D8B3 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Chmp4bQ9D8B3 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Chmp4bQ9D8B3 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Chmp4bQ9D8B3 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Chmp4bQ9D8B3 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Chmp4bQ9D8B3 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Chmp4bQ9D8B3 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Chmp4bQ9D8B3 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Chmp4bQ9D8B3 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Chmp4bQ9D8B3 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Chmp4bQ9D8B3 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms