Protein–RNA interactions for Protein: Q9D883

U2af1, Splicing factor U2AF 35 kDa subunit, mousemouse

Known RBP Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2af1Q9D883 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
U2af1Q9D883 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
U2af1Q9D883 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
U2af1Q9D883 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
U2af1Q9D883 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
U2af1Q9D883 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
U2af1Q9D883 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
U2af1Q9D883 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC17.01■□□□□ 0.31
U2af1Q9D883 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
U2af1Q9D883 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
U2af1Q9D883 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC17■□□□□ 0.31
U2af1Q9D883 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC17■□□□□ 0.31
U2af1Q9D883 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
U2af1Q9D883 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
U2af1Q9D883 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC17■□□□□ 0.31
U2af1Q9D883 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
U2af1Q9D883 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
U2af1Q9D883 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
U2af1Q9D883 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
U2af1Q9D883 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
U2af1Q9D883 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
U2af1Q9D883 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
U2af1Q9D883 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC17■□□□□ 0.31
U2af1Q9D883 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
U2af1Q9D883 Gm12502-201ENSMUST00000120197 444 ntBASIC17■□□□□ 0.31
U2af1Q9D883 Gm11793-201ENSMUST00000120433 981 ntBASIC17■□□□□ 0.31
U2af1Q9D883 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
U2af1Q9D883 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC17■□□□□ 0.31
U2af1Q9D883 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC17■□□□□ 0.31
U2af1Q9D883 Gm38158-201ENSMUST00000194617 339 ntBASIC17■□□□□ 0.31
U2af1Q9D883 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC17■□□□□ 0.31
U2af1Q9D883 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC17■□□□□ 0.31
U2af1Q9D883 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
U2af1Q9D883 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC17■□□□□ 0.31
U2af1Q9D883 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
U2af1Q9D883 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
U2af1Q9D883 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
U2af1Q9D883 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
U2af1Q9D883 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
U2af1Q9D883 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
U2af1Q9D883 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC17■□□□□ 0.31
U2af1Q9D883 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
U2af1Q9D883 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
U2af1Q9D883 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
U2af1Q9D883 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
U2af1Q9D883 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
U2af1Q9D883 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
U2af1Q9D883 AC238940.1-201ENSMUST00000225106 1858 ntBASIC16.99■□□□□ 0.31
U2af1Q9D883 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
U2af1Q9D883 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
U2af1Q9D883 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC16.99■□□□□ 0.31
U2af1Q9D883 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
U2af1Q9D883 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
U2af1Q9D883 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
U2af1Q9D883 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
U2af1Q9D883 Gm27501-201ENSMUST00000183599 107 ntBASIC16.99■□□□□ 0.31
U2af1Q9D883 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
U2af1Q9D883 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC16.99■□□□□ 0.31
U2af1Q9D883 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
U2af1Q9D883 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
U2af1Q9D883 AC159896.2-201ENSMUST00000214753 269 ntBASIC16.99■□□□□ 0.31
U2af1Q9D883 AC154319.1-201ENSMUST00000216330 312 ntBASIC16.99■□□□□ 0.31
U2af1Q9D883 Gm45930-201ENSMUST00000221330 292 ntBASIC16.99■□□□□ 0.31
U2af1Q9D883 AL589735.1-201ENSMUST00000224353 270 ntBASIC16.99■□□□□ 0.31
U2af1Q9D883 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
U2af1Q9D883 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
U2af1Q9D883 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC16.99■□□□□ 0.31
U2af1Q9D883 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC16.99■□□□□ 0.31
U2af1Q9D883 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC16.99■□□□□ 0.31
U2af1Q9D883 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
U2af1Q9D883 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
U2af1Q9D883 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
U2af1Q9D883 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC16.99■□□□□ 0.31
U2af1Q9D883 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
U2af1Q9D883 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
U2af1Q9D883 Gm44094-201ENSMUST00000204703 2030 ntBASIC16.99■□□□□ 0.31
U2af1Q9D883 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
U2af1Q9D883 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
U2af1Q9D883 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
U2af1Q9D883 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
U2af1Q9D883 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
U2af1Q9D883 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
U2af1Q9D883 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
U2af1Q9D883 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC16.98■□□□□ 0.31
U2af1Q9D883 Gm6203-201ENSMUST00000209575 1342 ntBASIC16.98■□□□□ 0.31
U2af1Q9D883 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
U2af1Q9D883 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
U2af1Q9D883 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
U2af1Q9D883 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
U2af1Q9D883 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
U2af1Q9D883 Gm6023-201ENSMUST00000118217 606 ntBASIC16.98■□□□□ 0.31
U2af1Q9D883 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC16.98■□□□□ 0.31
U2af1Q9D883 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC16.98■□□□□ 0.31
U2af1Q9D883 Gm23363-201ENSMUST00000175024 79 ntBASIC16.98■□□□□ 0.31
U2af1Q9D883 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC16.98■□□□□ 0.31
U2af1Q9D883 Gm42627-201ENSMUST00000197347 224 ntBASIC16.98■□□□□ 0.31
U2af1Q9D883 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
U2af1Q9D883 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC16.98■□□□□ 0.31
U2af1Q9D883 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
U2af1Q9D883 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 43.3 ms