Protein–RNA interactions for Protein: Q9CYW4

Hdhd3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, mousemouse

Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdhd3Q9CYW4 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Hdhd3Q9CYW4 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC10.53□□□□□ -0.72
Hdhd3Q9CYW4 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Hdhd3Q9CYW4 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Hdhd3Q9CYW4 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Hdhd3Q9CYW4 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Hdhd3Q9CYW4 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Hdhd3Q9CYW4 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Hdhd3Q9CYW4 Gm38037-201ENSMUST00000192600 1624 ntBASIC10.53□□□□□ -0.72
Hdhd3Q9CYW4 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Hdhd3Q9CYW4 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC10.53□□□□□ -0.72
Hdhd3Q9CYW4 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Hdhd3Q9CYW4 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Hdhd3Q9CYW4 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Hdhd3Q9CYW4 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Hdhd3Q9CYW4 Gm43075-201ENSMUST00000198613 3905 ntBASIC10.53□□□□□ -0.72
Hdhd3Q9CYW4 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Hdhd3Q9CYW4 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC10.53□□□□□ -0.72
Hdhd3Q9CYW4 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Hdhd3Q9CYW4 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Hdhd3Q9CYW4 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Hdhd3Q9CYW4 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Hdhd3Q9CYW4 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
Hdhd3Q9CYW4 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.72
Hdhd3Q9CYW4 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.72
Hdhd3Q9CYW4 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.72
Hdhd3Q9CYW4 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC10.52□□□□□ -0.72
Hdhd3Q9CYW4 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.72
Hdhd3Q9CYW4 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
Hdhd3Q9CYW4 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
Hdhd3Q9CYW4 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.72
Hdhd3Q9CYW4 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
Hdhd3Q9CYW4 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
Hdhd3Q9CYW4 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Hdhd3Q9CYW4 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Hdhd3Q9CYW4 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Hdhd3Q9CYW4 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Hdhd3Q9CYW4 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Hdhd3Q9CYW4 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
Hdhd3Q9CYW4 Wdr33-201ENSMUST00000025264 6206 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
Hdhd3Q9CYW4 Kalrn-201ENSMUST00000076810 8940 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
Hdhd3Q9CYW4 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Hdhd3Q9CYW4 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Hdhd3Q9CYW4 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC10.52□□□□□ -0.73
Hdhd3Q9CYW4 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC10.52□□□□□ -0.73
Hdhd3Q9CYW4 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC10.52□□□□□ -0.73
Hdhd3Q9CYW4 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC10.52□□□□□ -0.73
Hdhd3Q9CYW4 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC10.52□□□□□ -0.73
Hdhd3Q9CYW4 Gm27525-201ENSMUST00000184465 107 ntBASIC10.52□□□□□ -0.73
Hdhd3Q9CYW4 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC10.52□□□□□ -0.73
Hdhd3Q9CYW4 Gm29608-201ENSMUST00000190444 463 ntBASIC10.52□□□□□ -0.73
Hdhd3Q9CYW4 Gm38294-201ENSMUST00000192831 381 ntBASIC10.52□□□□□ -0.73
Hdhd3Q9CYW4 Gm43703-201ENSMUST00000200523 763 ntBASIC10.52□□□□□ -0.73
Hdhd3Q9CYW4 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Hdhd3Q9CYW4 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC10.52□□□□□ -0.73
Hdhd3Q9CYW4 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC10.52□□□□□ -0.73
Hdhd3Q9CYW4 Gm5425-201ENSMUST00000214125 459 ntBASIC10.52□□□□□ -0.73
Hdhd3Q9CYW4 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC10.52□□□□□ -0.73
Hdhd3Q9CYW4 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC10.52□□□□□ -0.73
Hdhd3Q9CYW4 Rbfox2-208ENSMUST00000227930 1218 ntBASIC10.52□□□□□ -0.73
Hdhd3Q9CYW4 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Hdhd3Q9CYW4 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Hdhd3Q9CYW4 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
Hdhd3Q9CYW4 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Hdhd3Q9CYW4 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Hdhd3Q9CYW4 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Hdhd3Q9CYW4 Gm27177-202ENSMUST00000183514 2703 ntBASIC10.52□□□□□ -0.73
Hdhd3Q9CYW4 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
Hdhd3Q9CYW4 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Hdhd3Q9CYW4 Sptbn2-201ENSMUST00000008991 8251 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Hdhd3Q9CYW4 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
Hdhd3Q9CYW4 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC10.52□□□□□ -0.73
Hdhd3Q9CYW4 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Hdhd3Q9CYW4 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Hdhd3Q9CYW4 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Hdhd3Q9CYW4 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Hdhd3Q9CYW4 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Hdhd3Q9CYW4 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Hdhd3Q9CYW4 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC10.51□□□□□ -0.73
Hdhd3Q9CYW4 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC10.51□□□□□ -0.73
Hdhd3Q9CYW4 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Hdhd3Q9CYW4 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
Hdhd3Q9CYW4 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Hdhd3Q9CYW4 Gm7104-201ENSMUST00000179741 2532 ntBASIC10.51□□□□□ -0.73
Hdhd3Q9CYW4 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Hdhd3Q9CYW4 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Hdhd3Q9CYW4 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Hdhd3Q9CYW4 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Hdhd3Q9CYW4 Mbnl2-204ENSMUST00000227012 2390 ntBASIC10.51□□□□□ -0.73
Hdhd3Q9CYW4 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
Hdhd3Q9CYW4 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
Hdhd3Q9CYW4 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Hdhd3Q9CYW4 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Hdhd3Q9CYW4 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Hdhd3Q9CYW4 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Hdhd3Q9CYW4 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC10.51□□□□□ -0.73
Hdhd3Q9CYW4 Gm27741-201ENSMUST00000185060 237 ntBASIC10.51□□□□□ -0.73
Hdhd3Q9CYW4 Gm8000-201ENSMUST00000188378 592 ntBASIC10.51□□□□□ -0.73
Hdhd3Q9CYW4 Gm18905-201ENSMUST00000205454 928 ntBASIC10.51□□□□□ -0.73
Hdhd3Q9CYW4 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 44.5 ms