Protein–RNA interactions for Protein: Q9CYB0

Trim13, E3 ubiquitin-protein ligase TRIM13, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13Q9CYB0 Adcy8-201ENSMUST00000023007 6990 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trim13Q9CYB0 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC11.98□□□□□ -0.49
Trim13Q9CYB0 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trim13Q9CYB0 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trim13Q9CYB0 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trim13Q9CYB0 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trim13Q9CYB0 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC11.98□□□□□ -0.49
Trim13Q9CYB0 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trim13Q9CYB0 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trim13Q9CYB0 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trim13Q9CYB0 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trim13Q9CYB0 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trim13Q9CYB0 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trim13Q9CYB0 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC11.98□□□□□ -0.49
Trim13Q9CYB0 Flnc-201ENSMUST00000065090 9038 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trim13Q9CYB0 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trim13Q9CYB0 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trim13Q9CYB0 Thsd4-202ENSMUST00000098660 8796 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trim13Q9CYB0 Gpld1-201ENSMUST00000021773 5224 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Trim13Q9CYB0 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trim13Q9CYB0 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
Trim13Q9CYB0 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trim13Q9CYB0 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trim13Q9CYB0 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trim13Q9CYB0 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trim13Q9CYB0 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trim13Q9CYB0 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trim13Q9CYB0 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC11.97□□□□□ -0.49
Trim13Q9CYB0 Gm38187-201ENSMUST00000195609 4709 ntBASIC11.97□□□□□ -0.49
Trim13Q9CYB0 Gm12537-201ENSMUST00000119266 1002 ntBASIC11.97□□□□□ -0.49
Trim13Q9CYB0 Gm12070-201ENSMUST00000119551 1002 ntBASIC11.97□□□□□ -0.49
Trim13Q9CYB0 Gm12671-201ENSMUST00000119978 1002 ntBASIC11.97□□□□□ -0.49
Trim13Q9CYB0 Gm13292-201ENSMUST00000120014 1000 ntBASIC11.97□□□□□ -0.49
Trim13Q9CYB0 Gm12403-201ENSMUST00000121384 959 ntBASIC11.97□□□□□ -0.49
Trim13Q9CYB0 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC11.97□□□□□ -0.49
Trim13Q9CYB0 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC11.97□□□□□ -0.49
Trim13Q9CYB0 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC11.97□□□□□ -0.49
Trim13Q9CYB0 Gm10359-201ENSMUST00000180167 1002 ntBASIC11.97□□□□□ -0.49
Trim13Q9CYB0 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trim13Q9CYB0 Gm12033-201ENSMUST00000180654 1002 ntBASIC11.97□□□□□ -0.49
Trim13Q9CYB0 Gm5559-201ENSMUST00000180755 1002 ntBASIC11.97□□□□□ -0.49
Trim13Q9CYB0 Gm4335-201ENSMUST00000182581 1004 ntBASIC11.97□□□□□ -0.49
Trim13Q9CYB0 Gm43703-201ENSMUST00000200523 763 ntBASIC11.97□□□□□ -0.49
Trim13Q9CYB0 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Trim13Q9CYB0 AC139382.1-201ENSMUST00000221402 498 ntBASIC11.97□□□□□ -0.49
Trim13Q9CYB0 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trim13Q9CYB0 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trim13Q9CYB0 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trim13Q9CYB0 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trim13Q9CYB0 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trim13Q9CYB0 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trim13Q9CYB0 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trim13Q9CYB0 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trim13Q9CYB0 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trim13Q9CYB0 Gm42690-201ENSMUST00000197921 1836 ntBASIC11.97□□□□□ -0.49
Trim13Q9CYB0 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC11.97□□□□□ -0.49
Trim13Q9CYB0 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC11.97□□□□□ -0.49
Trim13Q9CYB0 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Trim13Q9CYB0 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trim13Q9CYB0 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trim13Q9CYB0 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trim13Q9CYB0 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trim13Q9CYB0 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC11.96□□□□□ -0.49
Trim13Q9CYB0 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trim13Q9CYB0 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Trim13Q9CYB0 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Trim13Q9CYB0 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC11.96□□□□□ -0.49
Trim13Q9CYB0 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trim13Q9CYB0 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Trim13Q9CYB0 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trim13Q9CYB0 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trim13Q9CYB0 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trim13Q9CYB0 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trim13Q9CYB0 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trim13Q9CYB0 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trim13Q9CYB0 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
Trim13Q9CYB0 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trim13Q9CYB0 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC11.96□□□□□ -0.49
Trim13Q9CYB0 Gm14730-201ENSMUST00000122378 1045 ntBASIC11.96□□□□□ -0.49
Trim13Q9CYB0 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trim13Q9CYB0 Gm27430-201ENSMUST00000184585 107 ntBASIC11.96□□□□□ -0.49
Trim13Q9CYB0 Gm44333-201ENSMUST00000197168 107 ntBASIC11.96□□□□□ -0.49
Trim13Q9CYB0 Gm7498-201ENSMUST00000203282 1084 ntBASIC11.96□□□□□ -0.49
Trim13Q9CYB0 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
Trim13Q9CYB0 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trim13Q9CYB0 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Trim13Q9CYB0 AC093022.5-201ENSMUST00000226841 1079 ntBASIC11.96□□□□□ -0.49
Trim13Q9CYB0 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trim13Q9CYB0 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trim13Q9CYB0 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trim13Q9CYB0 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trim13Q9CYB0 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trim13Q9CYB0 Gm8798-201ENSMUST00000211877 1661 ntBASIC11.96□□□□□ -0.5
Trim13Q9CYB0 Pafah1b2-201ENSMUST00000172450 6873 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trim13Q9CYB0 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Trim13Q9CYB0 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trim13Q9CYB0 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC11.96□□□□□ -0.5
Trim13Q9CYB0 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Trim13Q9CYB0 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trim13Q9CYB0 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 44.2 ms