Protein–RNA interactions for Protein: Q9CY50

Ssr1, Translocon-associated protein subunit alpha, mousemouse

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr1Q9CY50 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ssr1Q9CY50 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ssr1Q9CY50 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC14.12□□□□□ -0.15
Ssr1Q9CY50 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ssr1Q9CY50 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ssr1Q9CY50 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ssr1Q9CY50 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ssr1Q9CY50 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Ssr1Q9CY50 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ssr1Q9CY50 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Ssr1Q9CY50 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ssr1Q9CY50 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ssr1Q9CY50 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ssr1Q9CY50 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Ssr1Q9CY50 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC14.12□□□□□ -0.15
Ssr1Q9CY50 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC14.12□□□□□ -0.15
Ssr1Q9CY50 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
Ssr1Q9CY50 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Ssr1Q9CY50 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
Ssr1Q9CY50 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC14.12□□□□□ -0.15
Ssr1Q9CY50 Gm5279-201ENSMUST00000199575 745 ntBASIC14.12□□□□□ -0.15
Ssr1Q9CY50 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC14.12□□□□□ -0.15
Ssr1Q9CY50 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC14.12□□□□□ -0.15
Ssr1Q9CY50 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Ssr1Q9CY50 AC132863.2-201ENSMUST00000226643 799 ntBASIC14.12□□□□□ -0.15
Ssr1Q9CY50 Gm5161-201ENSMUST00000075243 853 ntBASIC14.12□□□□□ -0.15
Ssr1Q9CY50 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Ssr1Q9CY50 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ssr1Q9CY50 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ssr1Q9CY50 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC14.12□□□□□ -0.15
Ssr1Q9CY50 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ssr1Q9CY50 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ssr1Q9CY50 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ssr1Q9CY50 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ssr1Q9CY50 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Ssr1Q9CY50 Slc25a36-202ENSMUST00000085206 5227 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ssr1Q9CY50 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ssr1Q9CY50 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC14.11□□□□□ -0.15
Ssr1Q9CY50 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ssr1Q9CY50 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ssr1Q9CY50 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC14.11□□□□□ -0.15
Ssr1Q9CY50 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ssr1Q9CY50 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC14.11□□□□□ -0.15
Ssr1Q9CY50 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Ssr1Q9CY50 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ssr1Q9CY50 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Ssr1Q9CY50 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC14.11□□□□□ -0.15
Ssr1Q9CY50 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC14.11□□□□□ -0.15
Ssr1Q9CY50 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC14.11□□□□□ -0.15
Ssr1Q9CY50 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Ssr1Q9CY50 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC14.11□□□□□ -0.15
Ssr1Q9CY50 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC14.11□□□□□ -0.15
Ssr1Q9CY50 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Ssr1Q9CY50 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Ssr1Q9CY50 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ssr1Q9CY50 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Ssr1Q9CY50 Mfsd7a-201ENSMUST00000031455 2508 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ssr1Q9CY50 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ssr1Q9CY50 AC137842.1-201ENSMUST00000227896 2064 ntBASIC14.11□□□□□ -0.15
Ssr1Q9CY50 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
Ssr1Q9CY50 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ssr1Q9CY50 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ssr1Q9CY50 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Ssr1Q9CY50 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ssr1Q9CY50 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ssr1Q9CY50 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Ssr1Q9CY50 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Ssr1Q9CY50 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ssr1Q9CY50 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC14.1□□□□□ -0.15
Ssr1Q9CY50 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Ssr1Q9CY50 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Ssr1Q9CY50 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Ssr1Q9CY50 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ssr1Q9CY50 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ssr1Q9CY50 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC14.1□□□□□ -0.15
Ssr1Q9CY50 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Ssr1Q9CY50 Gm14719-201ENSMUST00000121891 340 ntBASIC14.1□□□□□ -0.15
Ssr1Q9CY50 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC14.1□□□□□ -0.15
Ssr1Q9CY50 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ssr1Q9CY50 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Ssr1Q9CY50 Gm29608-201ENSMUST00000190444 463 ntBASIC14.1□□□□□ -0.15
Ssr1Q9CY50 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC14.1□□□□□ -0.15
Ssr1Q9CY50 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Ssr1Q9CY50 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Ssr1Q9CY50 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
Ssr1Q9CY50 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ssr1Q9CY50 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Ssr1Q9CY50 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ssr1Q9CY50 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC14.1□□□□□ -0.15
Ssr1Q9CY50 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Ssr1Q9CY50 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC14.1□□□□□ -0.15
Ssr1Q9CY50 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ssr1Q9CY50 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ssr1Q9CY50 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ssr1Q9CY50 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ssr1Q9CY50 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ssr1Q9CY50 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ssr1Q9CY50 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Ssr1Q9CY50 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ssr1Q9CY50 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 53.1 ms