Protein–RNA interactions for Protein: Q99JR8

Smarcd2, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2, mousemouse

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd2Q99JR8 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Smarcd2Q99JR8 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Smarcd2Q99JR8 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Smarcd2Q99JR8 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Smarcd2Q99JR8 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Smarcd2Q99JR8 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Smarcd2Q99JR8 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Smarcd2Q99JR8 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Smarcd2Q99JR8 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Smarcd2Q99JR8 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Smarcd2Q99JR8 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Smarcd2Q99JR8 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Smarcd2Q99JR8 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Smarcd2Q99JR8 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Smarcd2Q99JR8 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Smarcd2Q99JR8 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC13.05□□□□□ -0.32
Smarcd2Q99JR8 Gm4864-201ENSMUST00000219894 1461 ntBASIC13.05□□□□□ -0.32
Smarcd2Q99JR8 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Smarcd2Q99JR8 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Smarcd2Q99JR8 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Smarcd2Q99JR8 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Smarcd2Q99JR8 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Smarcd2Q99JR8 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Smarcd2Q99JR8 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Smarcd2Q99JR8 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC13.05□□□□□ -0.32
Smarcd2Q99JR8 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC13.05□□□□□ -0.32
Smarcd2Q99JR8 Gm12217-201ENSMUST00000118858 696 ntBASIC13.05□□□□□ -0.32
Smarcd2Q99JR8 Cep97-206ENSMUST00000122280 1057 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Smarcd2Q99JR8 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
Smarcd2Q99JR8 Gm22902-201ENSMUST00000158488 302 ntBASIC13.05□□□□□ -0.32
Smarcd2Q99JR8 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Smarcd2Q99JR8 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC13.05□□□□□ -0.32
Smarcd2Q99JR8 Gm25700-201ENSMUST00000177693 110 ntBASIC13.05□□□□□ -0.32
Smarcd2Q99JR8 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Smarcd2Q99JR8 Mir339-201ENSMUST00000083659 96 ntBASIC13.05□□□□□ -0.32
Smarcd2Q99JR8 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
Smarcd2Q99JR8 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC13.05□□□□□ -0.32
Smarcd2Q99JR8 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC13.05□□□□□ -0.32
Smarcd2Q99JR8 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Smarcd2Q99JR8 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Smarcd2Q99JR8 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC13.05□□□□□ -0.32
Smarcd2Q99JR8 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Smarcd2Q99JR8 Crry-ps-201ENSMUST00000079090 1309 ntBASIC13.05□□□□□ -0.32
Smarcd2Q99JR8 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC13.05□□□□□ -0.32
Smarcd2Q99JR8 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Smarcd2Q99JR8 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Smarcd2Q99JR8 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Smarcd2Q99JR8 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Smarcd2Q99JR8 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Smarcd2Q99JR8 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Smarcd2Q99JR8 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Smarcd2Q99JR8 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Smarcd2Q99JR8 AC126444.1-201ENSMUST00000225938 1768 ntBASIC13.04□□□□□ -0.32
Smarcd2Q99JR8 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC13.04□□□□□ -0.32
Smarcd2Q99JR8 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Smarcd2Q99JR8 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Smarcd2Q99JR8 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Smarcd2Q99JR8 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Smarcd2Q99JR8 Pcgf5-211ENSMUST00000225920 6443 ntBASIC13.04□□□□□ -0.32
Smarcd2Q99JR8 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Smarcd2Q99JR8 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Smarcd2Q99JR8 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Smarcd2Q99JR8 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC13.04□□□□□ -0.32
Smarcd2Q99JR8 Tmem40-205ENSMUST00000166254 811 ntAPPRIS P3 TSL 5 BASIC13.04□□□□□ -0.32
Smarcd2Q99JR8 Gm8018-201ENSMUST00000173536 789 ntBASIC13.04□□□□□ -0.32
Smarcd2Q99JR8 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Smarcd2Q99JR8 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Smarcd2Q99JR8 Gm27023-201ENSMUST00000182372 285 ntBASIC13.04□□□□□ -0.32
Smarcd2Q99JR8 Mir6927-201ENSMUST00000184494 71 ntBASIC13.04□□□□□ -0.32
Smarcd2Q99JR8 Gm44262-201ENSMUST00000204969 372 ntBASIC13.04□□□□□ -0.32
Smarcd2Q99JR8 Gm44651-201ENSMUST00000207343 372 ntBASIC13.04□□□□□ -0.32
Smarcd2Q99JR8 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC13.04□□□□□ -0.32
Smarcd2Q99JR8 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Smarcd2Q99JR8 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Smarcd2Q99JR8 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Smarcd2Q99JR8 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Smarcd2Q99JR8 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Smarcd2Q99JR8 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Smarcd2Q99JR8 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC13.04□□□□□ -0.32
Smarcd2Q99JR8 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Smarcd2Q99JR8 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Smarcd2Q99JR8 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Smarcd2Q99JR8 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Smarcd2Q99JR8 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Smarcd2Q99JR8 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Smarcd2Q99JR8 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Smarcd2Q99JR8 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Smarcd2Q99JR8 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Smarcd2Q99JR8 Gm43908-201ENSMUST00000205074 1472 ntBASIC13.04□□□□□ -0.32
Smarcd2Q99JR8 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Smarcd2Q99JR8 Gm45546-201ENSMUST00000211053 2394 ntBASIC13.03□□□□□ -0.32
Smarcd2Q99JR8 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Smarcd2Q99JR8 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC13.03□□□□□ -0.32
Smarcd2Q99JR8 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Smarcd2Q99JR8 Gm9025-201ENSMUST00000122415 1575 ntBASIC13.03□□□□□ -0.32
Smarcd2Q99JR8 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Smarcd2Q99JR8 AC113060.1-201ENSMUST00000225689 1573 ntBASIC13.03□□□□□ -0.32
Smarcd2Q99JR8 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Smarcd2Q99JR8 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Smarcd2Q99JR8 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 92.8 ms