Protein–RNA interactions for Protein: Q99J95

Cdk9, Cyclin-dependent kinase 9, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk9Q99J95 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cdk9Q99J95 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cdk9Q99J95 AC159195.1-201ENSMUST00000225867 2086 ntBASIC13.06□□□□□ -0.32
Cdk9Q99J95 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cdk9Q99J95 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cdk9Q99J95 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cdk9Q99J95 Zkscan3-207ENSMUST00000223831 2101 ntBASIC13.06□□□□□ -0.32
Cdk9Q99J95 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Cdk9Q99J95 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Cdk9Q99J95 AC157950.1-201ENSMUST00000217561 2168 ntBASIC13.05□□□□□ -0.32
Cdk9Q99J95 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Cdk9Q99J95 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC13.05□□□□□ -0.32
Cdk9Q99J95 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cdk9Q99J95 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cdk9Q99J95 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Cdk9Q99J95 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cdk9Q99J95 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Cdk9Q99J95 Gm43045-201ENSMUST00000198725 2095 ntBASIC13.05□□□□□ -0.32
Cdk9Q99J95 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cdk9Q99J95 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC13.05□□□□□ -0.32
Cdk9Q99J95 Gm12585-201ENSMUST00000117307 290 ntBASIC13.05□□□□□ -0.32
Cdk9Q99J95 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC13.05□□□□□ -0.32
Cdk9Q99J95 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC13.05□□□□□ -0.32
Cdk9Q99J95 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC13.05□□□□□ -0.32
Cdk9Q99J95 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC13.05□□□□□ -0.32
Cdk9Q99J95 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Cdk9Q99J95 Gm38294-201ENSMUST00000192831 381 ntBASIC13.05□□□□□ -0.32
Cdk9Q99J95 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Cdk9Q99J95 Gm46209-201ENSMUST00000217912 553 ntBASIC13.05□□□□□ -0.32
Cdk9Q99J95 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC13.05□□□□□ -0.32
Cdk9Q99J95 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cdk9Q99J95 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cdk9Q99J95 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC13.05□□□□□ -0.32
Cdk9Q99J95 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Cdk9Q99J95 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cdk9Q99J95 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Cdk9Q99J95 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cdk9Q99J95 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cdk9Q99J95 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cdk9Q99J95 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Cdk9Q99J95 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cdk9Q99J95 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Cdk9Q99J95 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Cdk9Q99J95 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cdk9Q99J95 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Cdk9Q99J95 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Cdk9Q99J95 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cdk9Q99J95 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Cdk9Q99J95 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cdk9Q99J95 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cdk9Q99J95 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cdk9Q99J95 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Cdk9Q99J95 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cdk9Q99J95 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Cdk9Q99J95 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cdk9Q99J95 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cdk9Q99J95 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cdk9Q99J95 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cdk9Q99J95 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cdk9Q99J95 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Cdk9Q99J95 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cdk9Q99J95 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC13.04□□□□□ -0.32
Cdk9Q99J95 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cdk9Q99J95 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cdk9Q99J95 Gm7820-201ENSMUST00000121012 1052 ntBASIC13.04□□□□□ -0.32
Cdk9Q99J95 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC13.04□□□□□ -0.32
Cdk9Q99J95 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC13.04□□□□□ -0.32
Cdk9Q99J95 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Cdk9Q99J95 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Cdk9Q99J95 Gm17837-201ENSMUST00000186435 985 ntBASIC13.04□□□□□ -0.32
Cdk9Q99J95 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Cdk9Q99J95 Gm20949-201ENSMUST00000206478 952 ntBASIC13.04□□□□□ -0.32
Cdk9Q99J95 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC13.04□□□□□ -0.32
Cdk9Q99J95 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Cdk9Q99J95 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC13.04□□□□□ -0.32
Cdk9Q99J95 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
Cdk9Q99J95 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Cdk9Q99J95 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC13.04□□□□□ -0.32
Cdk9Q99J95 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cdk9Q99J95 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cdk9Q99J95 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Cdk9Q99J95 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cdk9Q99J95 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Cdk9Q99J95 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC13.04□□□□□ -0.32
Cdk9Q99J95 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cdk9Q99J95 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC13.04□□□□□ -0.32
Cdk9Q99J95 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC13.04□□□□□ -0.32
Cdk9Q99J95 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cdk9Q99J95 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cdk9Q99J95 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Cdk9Q99J95 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cdk9Q99J95 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cdk9Q99J95 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cdk9Q99J95 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cdk9Q99J95 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cdk9Q99J95 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Cdk9Q99J95 Gm37014-201ENSMUST00000194723 2253 ntBASIC13.04□□□□□ -0.32
Cdk9Q99J95 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC13.04□□□□□ -0.32
Cdk9Q99J95 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cdk9Q99J95 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 160.1 ms