Protein–RNA interactions for Protein: Q91Y16

Pcdha3, Protocadherin alpha 3, mousemouse

Predictions only

Length 942 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha3Q91Y16 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdha3Q91Y16 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdha3Q91Y16 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdha3Q91Y16 Gm29127-201ENSMUST00000188304 517 ntBASIC13.56□□□□□ -0.24
Pcdha3Q91Y16 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC13.56□□□□□ -0.24
Pcdha3Q91Y16 Gm29705-201ENSMUST00000212598 474 ntBASIC13.56□□□□□ -0.24
Pcdha3Q91Y16 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdha3Q91Y16 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdha3Q91Y16 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdha3Q91Y16 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC13.56□□□□□ -0.24
Pcdha3Q91Y16 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdha3Q91Y16 Pck2-205ENSMUST00000226352 2784 ntBASIC13.56□□□□□ -0.24
Pcdha3Q91Y16 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC13.56□□□□□ -0.24
Pcdha3Q91Y16 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Pcdha3Q91Y16 Gm42863-201ENSMUST00000197875 2958 ntBASIC13.56□□□□□ -0.24
Pcdha3Q91Y16 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
Pcdha3Q91Y16 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC13.56□□□□□ -0.24
Pcdha3Q91Y16 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdha3Q91Y16 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Pcdha3Q91Y16 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdha3Q91Y16 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdha3Q91Y16 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdha3Q91Y16 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC13.55□□□□□ -0.24
Pcdha3Q91Y16 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdha3Q91Y16 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdha3Q91Y16 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdha3Q91Y16 AC164702.1-201ENSMUST00000220135 2212 ntBASIC13.55□□□□□ -0.24
Pcdha3Q91Y16 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC13.55□□□□□ -0.24
Pcdha3Q91Y16 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdha3Q91Y16 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdha3Q91Y16 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdha3Q91Y16 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdha3Q91Y16 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC13.55□□□□□ -0.24
Pcdha3Q91Y16 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Pcdha3Q91Y16 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC13.55□□□□□ -0.24
Pcdha3Q91Y16 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdha3Q91Y16 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC13.55□□□□□ -0.24
Pcdha3Q91Y16 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC13.55□□□□□ -0.24
Pcdha3Q91Y16 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC13.55□□□□□ -0.24
Pcdha3Q91Y16 Gm9299-201ENSMUST00000206392 1140 ntBASIC13.55□□□□□ -0.24
Pcdha3Q91Y16 AC154276.1-201ENSMUST00000228874 1299 ntBASIC13.55□□□□□ -0.24
Pcdha3Q91Y16 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdha3Q91Y16 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdha3Q91Y16 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdha3Q91Y16 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdha3Q91Y16 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdha3Q91Y16 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdha3Q91Y16 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdha3Q91Y16 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdha3Q91Y16 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdha3Q91Y16 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdha3Q91Y16 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdha3Q91Y16 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Pcdha3Q91Y16 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdha3Q91Y16 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdha3Q91Y16 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Pcdha3Q91Y16 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdha3Q91Y16 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdha3Q91Y16 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdha3Q91Y16 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC13.54□□□□□ -0.24
Pcdha3Q91Y16 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdha3Q91Y16 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdha3Q91Y16 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdha3Q91Y16 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdha3Q91Y16 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdha3Q91Y16 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdha3Q91Y16 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC13.54□□□□□ -0.24
Pcdha3Q91Y16 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC13.54□□□□□ -0.24
Pcdha3Q91Y16 Gm11978-201ENSMUST00000122315 466 ntBASIC13.54□□□□□ -0.24
Pcdha3Q91Y16 Gm4271-201ENSMUST00000174444 973 ntBASIC13.54□□□□□ -0.24
Pcdha3Q91Y16 Gm27331-201ENSMUST00000183705 60 ntBASIC13.54□□□□□ -0.24
Pcdha3Q91Y16 Gm45784-201ENSMUST00000188360 142 ntBASIC13.54□□□□□ -0.24
Pcdha3Q91Y16 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC13.54□□□□□ -0.24
Pcdha3Q91Y16 Gm43818-201ENSMUST00000200605 466 ntBASIC13.54□□□□□ -0.24
Pcdha3Q91Y16 AC122305.4-201ENSMUST00000216159 1206 ntBASIC13.54□□□□□ -0.24
Pcdha3Q91Y16 AC135669.1-202ENSMUST00000216742 540 ntBASIC13.54□□□□□ -0.24
Pcdha3Q91Y16 AC155237.1-201ENSMUST00000226196 1279 ntBASIC13.54□□□□□ -0.24
Pcdha3Q91Y16 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Pcdha3Q91Y16 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Pcdha3Q91Y16 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdha3Q91Y16 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdha3Q91Y16 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdha3Q91Y16 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdha3Q91Y16 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdha3Q91Y16 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdha3Q91Y16 Gm38049-201ENSMUST00000195698 1372 ntBASIC13.54□□□□□ -0.24
Pcdha3Q91Y16 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdha3Q91Y16 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdha3Q91Y16 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC13.54□□□□□ -0.24
Pcdha3Q91Y16 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdha3Q91Y16 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdha3Q91Y16 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdha3Q91Y16 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Pcdha3Q91Y16 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdha3Q91Y16 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC13.54□□□□□ -0.24
Pcdha3Q91Y16 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdha3Q91Y16 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdha3Q91Y16 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC13.54□□□□□ -0.24
Pcdha3Q91Y16 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdha3Q91Y16 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 84.4 ms