Protein–RNA interactions for Protein: Q91XZ9

Pcdhb20, Protocadherin beta 20, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb20Q91XZ9 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhb20Q91XZ9 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhb20Q91XZ9 Gm45779-201ENSMUST00000212189 4064 ntBASIC13.01□□□□□ -0.33
Pcdhb20Q91XZ9 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
Pcdhb20Q91XZ9 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC13□□□□□ -0.33
Pcdhb20Q91XZ9 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC13□□□□□ -0.33
Pcdhb20Q91XZ9 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdhb20Q91XZ9 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdhb20Q91XZ9 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdhb20Q91XZ9 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdhb20Q91XZ9 4930566F21Rik-201ENSMUST00000201177 1535 ntTSL 1 (best) BASIC13□□□□□ -0.33
Pcdhb20Q91XZ9 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC13□□□□□ -0.33
Pcdhb20Q91XZ9 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC13□□□□□ -0.33
Pcdhb20Q91XZ9 Gm37370-201ENSMUST00000191996 1410 ntBASIC13□□□□□ -0.33
Pcdhb20Q91XZ9 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdhb20Q91XZ9 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC13□□□□□ -0.33
Pcdhb20Q91XZ9 1700080N15Rik-202ENSMUST00000154360 1316 ntTSL 1 (best) BASIC13□□□□□ -0.33
Pcdhb20Q91XZ9 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdhb20Q91XZ9 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdhb20Q91XZ9 Rhox3f-201ENSMUST00000115172 833 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdhb20Q91XZ9 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC13□□□□□ -0.33
Pcdhb20Q91XZ9 Rhox3g-201ENSMUST00000119965 991 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Pcdhb20Q91XZ9 Gm25102-201ENSMUST00000122479 112 ntBASIC13□□□□□ -0.33
Pcdhb20Q91XZ9 Mir1894-201ENSMUST00000122802 81 ntBASIC13□□□□□ -0.33
Pcdhb20Q91XZ9 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC13□□□□□ -0.33
Pcdhb20Q91XZ9 Gm16284-201ENSMUST00000140995 400 ntBASIC13□□□□□ -0.33
Pcdhb20Q91XZ9 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC13□□□□□ -0.33
Pcdhb20Q91XZ9 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdhb20Q91XZ9 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
Pcdhb20Q91XZ9 Gm2541-201ENSMUST00000161209 711 ntBASIC13□□□□□ -0.33
Pcdhb20Q91XZ9 Gm6244-201ENSMUST00000178732 841 ntBASIC13□□□□□ -0.33
Pcdhb20Q91XZ9 Rhox3f-203ENSMUST00000184451 1008 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Pcdhb20Q91XZ9 Tac1-205ENSMUST00000185187 1230 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdhb20Q91XZ9 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC13□□□□□ -0.33
Pcdhb20Q91XZ9 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC13□□□□□ -0.33
Pcdhb20Q91XZ9 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC13□□□□□ -0.33
Pcdhb20Q91XZ9 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdhb20Q91XZ9 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC13□□□□□ -0.33
Pcdhb20Q91XZ9 Gm8463-201ENSMUST00000208573 613 ntBASIC13□□□□□ -0.33
Pcdhb20Q91XZ9 4933431C10Rik-201ENSMUST00000208973 1266 ntBASIC13□□□□□ -0.33
Pcdhb20Q91XZ9 Gm11149-203ENSMUST00000215465 805 ntTSL 1 (best) BASIC13□□□□□ -0.33
Pcdhb20Q91XZ9 AC159476.2-201ENSMUST00000216221 418 ntBASIC13□□□□□ -0.33
Pcdhb20Q91XZ9 Gm17870-201ENSMUST00000219489 1174 ntBASIC13□□□□□ -0.33
Pcdhb20Q91XZ9 AC132467.2-202ENSMUST00000227726 559 ntBASIC13□□□□□ -0.33
Pcdhb20Q91XZ9 Gm10371-202ENSMUST00000228010 1081 ntBASIC13□□□□□ -0.33
Pcdhb20Q91XZ9 Pf4-201ENSMUST00000031320 588 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdhb20Q91XZ9 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdhb20Q91XZ9 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC13□□□□□ -0.33
Pcdhb20Q91XZ9 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC13□□□□□ -0.33
Pcdhb20Q91XZ9 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdhb20Q91XZ9 Gm28182-201ENSMUST00000188354 2477 ntBASIC13□□□□□ -0.33
Pcdhb20Q91XZ9 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC13□□□□□ -0.33
Pcdhb20Q91XZ9 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdhb20Q91XZ9 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC13□□□□□ -0.33
Pcdhb20Q91XZ9 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC13□□□□□ -0.33
Pcdhb20Q91XZ9 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdhb20Q91XZ9 CT025610.1-201ENSMUST00000224552 1786 ntBASIC12.99□□□□□ -0.33
Pcdhb20Q91XZ9 Pax6-225ENSMUST00000167211 2814 ntAPPRIS P3 TSL 5 BASIC12.99□□□□□ -0.33
Pcdhb20Q91XZ9 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdhb20Q91XZ9 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdhb20Q91XZ9 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Pcdhb20Q91XZ9 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdhb20Q91XZ9 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC12.99□□□□□ -0.33
Pcdhb20Q91XZ9 Gm9816-201ENSMUST00000122292 1414 ntBASIC12.99□□□□□ -0.33
Pcdhb20Q91XZ9 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Pcdhb20Q91XZ9 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdhb20Q91XZ9 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdhb20Q91XZ9 Olfr3-201ENSMUST00000100151 942 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Pcdhb20Q91XZ9 Wfdc16-201ENSMUST00000109336 1116 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdhb20Q91XZ9 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC12.99□□□□□ -0.33
Pcdhb20Q91XZ9 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC12.99□□□□□ -0.33
Pcdhb20Q91XZ9 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Pcdhb20Q91XZ9 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdhb20Q91XZ9 Gm5538-201ENSMUST00000168156 1235 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Pcdhb20Q91XZ9 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdhb20Q91XZ9 Gm43057-201ENSMUST00000196789 429 ntTSL 5 BASIC12.99□□□□□ -0.33
Pcdhb20Q91XZ9 Gm43104-201ENSMUST00000197234 311 ntBASIC12.99□□□□□ -0.33
Pcdhb20Q91XZ9 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdhb20Q91XZ9 Gm44366-201ENSMUST00000204933 674 ntTSL 3 BASIC12.99□□□□□ -0.33
Pcdhb20Q91XZ9 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC12.99□□□□□ -0.33
Pcdhb20Q91XZ9 Olfr540-ps1-201ENSMUST00000210499 612 ntBASIC12.99□□□□□ -0.33
Pcdhb20Q91XZ9 AC154552.3-201ENSMUST00000220741 444 ntTSL 5 BASIC12.99□□□□□ -0.33
Pcdhb20Q91XZ9 AC121912.1-201ENSMUST00000227525 1201 ntBASIC12.99□□□□□ -0.33
Pcdhb20Q91XZ9 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdhb20Q91XZ9 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdhb20Q91XZ9 Olfr492-201ENSMUST00000079865 945 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Pcdhb20Q91XZ9 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdhb20Q91XZ9 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdhb20Q91XZ9 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdhb20Q91XZ9 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdhb20Q91XZ9 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdhb20Q91XZ9 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdhb20Q91XZ9 Asns-202ENSMUST00000115542 2016 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Pcdhb20Q91XZ9 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC12.99□□□□□ -0.33
Pcdhb20Q91XZ9 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdhb20Q91XZ9 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdhb20Q91XZ9 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC12.99□□□□□ -0.33
Pcdhb20Q91XZ9 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdhb20Q91XZ9 Gm10305-201ENSMUST00000195331 2475 ntBASIC12.99□□□□□ -0.33
Pcdhb20Q91XZ9 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms