Protein–RNA interactions for Protein: Q91XZ4

Pcdhb6, Protocadherin beta-6, mousemouse

Predictions only

Length 772 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb6Q91XZ4 Gm42442-201ENSMUST00000197951 1133 ntBASIC13.3□□□□□ -0.28
Pcdhb6Q91XZ4 Gm18916-201ENSMUST00000198264 1246 ntBASIC13.3□□□□□ -0.28
Pcdhb6Q91XZ4 Gm43416-201ENSMUST00000201916 1015 ntBASIC13.3□□□□□ -0.28
Pcdhb6Q91XZ4 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdhb6Q91XZ4 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdhb6Q91XZ4 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdhb6Q91XZ4 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC13.3□□□□□ -0.28
Pcdhb6Q91XZ4 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdhb6Q91XZ4 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdhb6Q91XZ4 Gm6210-201ENSMUST00000204734 1942 ntBASIC13.3□□□□□ -0.28
Pcdhb6Q91XZ4 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdhb6Q91XZ4 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC13.3□□□□□ -0.28
Pcdhb6Q91XZ4 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdhb6Q91XZ4 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC13.3□□□□□ -0.28
Pcdhb6Q91XZ4 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdhb6Q91XZ4 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdhb6Q91XZ4 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdhb6Q91XZ4 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdhb6Q91XZ4 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Pcdhb6Q91XZ4 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdhb6Q91XZ4 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Pcdhb6Q91XZ4 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdhb6Q91XZ4 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdhb6Q91XZ4 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdhb6Q91XZ4 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdhb6Q91XZ4 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdhb6Q91XZ4 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdhb6Q91XZ4 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdhb6Q91XZ4 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC13.29□□□□□ -0.28
Pcdhb6Q91XZ4 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC13.29□□□□□ -0.28
Pcdhb6Q91XZ4 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC13.29□□□□□ -0.28
Pcdhb6Q91XZ4 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Pcdhb6Q91XZ4 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdhb6Q91XZ4 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdhb6Q91XZ4 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdhb6Q91XZ4 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdhb6Q91XZ4 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdhb6Q91XZ4 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdhb6Q91XZ4 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdhb6Q91XZ4 Gm11478-201ENSMUST00000117851 599 ntBASIC13.29□□□□□ -0.28
Pcdhb6Q91XZ4 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC13.29□□□□□ -0.28
Pcdhb6Q91XZ4 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Pcdhb6Q91XZ4 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC13.29□□□□□ -0.28
Pcdhb6Q91XZ4 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC13.29□□□□□ -0.28
Pcdhb6Q91XZ4 5830487J09Rik-201ENSMUST00000198600 1256 ntTSL 5 BASIC13.29□□□□□ -0.28
Pcdhb6Q91XZ4 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdhb6Q91XZ4 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Pcdhb6Q91XZ4 Mir339-201ENSMUST00000083659 96 ntBASIC13.29□□□□□ -0.28
Pcdhb6Q91XZ4 Gm6091-201ENSMUST00000098307 165 ntBASIC13.29□□□□□ -0.28
Pcdhb6Q91XZ4 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdhb6Q91XZ4 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdhb6Q91XZ4 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC13.29□□□□□ -0.28
Pcdhb6Q91XZ4 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC13.29□□□□□ -0.28
Pcdhb6Q91XZ4 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdhb6Q91XZ4 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdhb6Q91XZ4 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdhb6Q91XZ4 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdhb6Q91XZ4 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdhb6Q91XZ4 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdhb6Q91XZ4 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdhb6Q91XZ4 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC13.29□□□□□ -0.28
Pcdhb6Q91XZ4 Gm27194-201ENSMUST00000175753 2936 ntBASIC13.29□□□□□ -0.28
Pcdhb6Q91XZ4 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdhb6Q91XZ4 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
Pcdhb6Q91XZ4 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdhb6Q91XZ4 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Pcdhb6Q91XZ4 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdhb6Q91XZ4 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Pcdhb6Q91XZ4 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhb6Q91XZ4 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhb6Q91XZ4 Gm8617-201ENSMUST00000118796 2222 ntBASIC13.28□□□□□ -0.28
Pcdhb6Q91XZ4 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhb6Q91XZ4 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhb6Q91XZ4 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhb6Q91XZ4 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhb6Q91XZ4 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhb6Q91XZ4 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC13.28□□□□□ -0.28
Pcdhb6Q91XZ4 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Pcdhb6Q91XZ4 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhb6Q91XZ4 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Pcdhb6Q91XZ4 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhb6Q91XZ4 Gm14921-201ENSMUST00000118643 908 ntBASIC13.28□□□□□ -0.28
Pcdhb6Q91XZ4 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC13.28□□□□□ -0.28
Pcdhb6Q91XZ4 Gm14704-201ENSMUST00000120300 874 ntBASIC13.28□□□□□ -0.28
Pcdhb6Q91XZ4 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhb6Q91XZ4 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhb6Q91XZ4 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhb6Q91XZ4 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC13.28□□□□□ -0.28
Pcdhb6Q91XZ4 Gm27839-201ENSMUST00000184242 106 ntBASIC13.28□□□□□ -0.28
Pcdhb6Q91XZ4 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhb6Q91XZ4 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC13.28□□□□□ -0.28
Pcdhb6Q91XZ4 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC13.28□□□□□ -0.28
Pcdhb6Q91XZ4 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhb6Q91XZ4 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhb6Q91XZ4 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhb6Q91XZ4 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Pcdhb6Q91XZ4 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhb6Q91XZ4 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhb6Q91XZ4 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhb6Q91XZ4 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 61.1 ms