Protein–RNA interactions for Protein: Q91VN6

Ddx41, Probable ATP-dependent RNA helicase DDX41, mousemouse

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx41Q91VN6 Gm42706-201ENSMUST00000199733 1910 ntBASIC14.88□□□□□ -0.03
Ddx41Q91VN6 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ddx41Q91VN6 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ddx41Q91VN6 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ddx41Q91VN6 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Ddx41Q91VN6 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ddx41Q91VN6 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Ddx41Q91VN6 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC14.88□□□□□ -0.03
Ddx41Q91VN6 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ddx41Q91VN6 Gm22018-201ENSMUST00000104357 131 ntBASIC14.88□□□□□ -0.03
Ddx41Q91VN6 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ddx41Q91VN6 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC14.88□□□□□ -0.03
Ddx41Q91VN6 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Ddx41Q91VN6 Mir1247-201ENSMUST00000116706 82 ntBASIC14.88□□□□□ -0.03
Ddx41Q91VN6 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Ddx41Q91VN6 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ddx41Q91VN6 Gm7029-201ENSMUST00000173226 450 ntBASIC14.88□□□□□ -0.03
Ddx41Q91VN6 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC14.88□□□□□ -0.03
Ddx41Q91VN6 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC14.88□□□□□ -0.03
Ddx41Q91VN6 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC14.88□□□□□ -0.03
Ddx41Q91VN6 Gm45880-201ENSMUST00000213041 853 ntBASIC14.88□□□□□ -0.03
Ddx41Q91VN6 Gm17823-201ENSMUST00000217830 1006 ntBASIC14.88□□□□□ -0.03
Ddx41Q91VN6 Tyms-ps-201ENSMUST00000219550 915 ntBASIC14.88□□□□□ -0.03
Ddx41Q91VN6 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ddx41Q91VN6 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ddx41Q91VN6 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Ddx41Q91VN6 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ddx41Q91VN6 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ddx41Q91VN6 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ddx41Q91VN6 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC14.88□□□□□ -0.03
Ddx41Q91VN6 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ddx41Q91VN6 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ddx41Q91VN6 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ddx41Q91VN6 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ddx41Q91VN6 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ddx41Q91VN6 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ddx41Q91VN6 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Ddx41Q91VN6 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Ddx41Q91VN6 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Ddx41Q91VN6 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ddx41Q91VN6 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Ddx41Q91VN6 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ddx41Q91VN6 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ddx41Q91VN6 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ddx41Q91VN6 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Ddx41Q91VN6 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ddx41Q91VN6 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ddx41Q91VN6 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC14.87□□□□□ -0.03
Ddx41Q91VN6 Gm6447-201ENSMUST00000118905 835 ntBASIC14.87□□□□□ -0.03
Ddx41Q91VN6 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Ddx41Q91VN6 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Ddx41Q91VN6 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ddx41Q91VN6 Gm10146-201ENSMUST00000072739 309 ntBASIC14.87□□□□□ -0.03
Ddx41Q91VN6 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ddx41Q91VN6 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ddx41Q91VN6 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ddx41Q91VN6 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Ddx41Q91VN6 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ddx41Q91VN6 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ddx41Q91VN6 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ddx41Q91VN6 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Ddx41Q91VN6 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC14.87□□□□□ -0.03
Ddx41Q91VN6 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC14.87□□□□□ -0.03
Ddx41Q91VN6 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC14.87□□□□□ -0.03
Ddx41Q91VN6 Gm5620-201ENSMUST00000077991 1348 ntBASIC14.87□□□□□ -0.03
Ddx41Q91VN6 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC14.87□□□□□ -0.03
Ddx41Q91VN6 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC14.87□□□□□ -0.03
Ddx41Q91VN6 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ddx41Q91VN6 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ddx41Q91VN6 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ddx41Q91VN6 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC14.86□□□□□ -0.03
Ddx41Q91VN6 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ddx41Q91VN6 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Ddx41Q91VN6 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ddx41Q91VN6 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Ddx41Q91VN6 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ddx41Q91VN6 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Ddx41Q91VN6 Gm13123-201ENSMUST00000122173 492 ntBASIC14.86□□□□□ -0.03
Ddx41Q91VN6 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC14.86□□□□□ -0.03
Ddx41Q91VN6 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC14.86□□□□□ -0.03
Ddx41Q91VN6 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Ddx41Q91VN6 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC14.86□□□□□ -0.03
Ddx41Q91VN6 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Ddx41Q91VN6 Gm44069-201ENSMUST00000204898 506 ntBASIC14.86□□□□□ -0.03
Ddx41Q91VN6 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
Ddx41Q91VN6 Gm6013-201ENSMUST00000212264 699 ntBASIC14.86□□□□□ -0.03
Ddx41Q91VN6 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Ddx41Q91VN6 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC14.86□□□□□ -0.03
Ddx41Q91VN6 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ddx41Q91VN6 Gm9823-201ENSMUST00000051212 327 ntBASIC14.86□□□□□ -0.03
Ddx41Q91VN6 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ddx41Q91VN6 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC14.86□□□□□ -0.03
Ddx41Q91VN6 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ddx41Q91VN6 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Ddx41Q91VN6 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ddx41Q91VN6 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ddx41Q91VN6 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Ddx41Q91VN6 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Ddx41Q91VN6 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ddx41Q91VN6 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 50.4 ms