Protein–RNA interactions for Protein: Q8R317

Ubqln1, Ubiquilin-1, mousemouse

Predictions only

Length 582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubqln1Q8R317 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ubqln1Q8R317 Gm38049-201ENSMUST00000195698 1372 ntBASIC12.3□□□□□ -0.44
Ubqln1Q8R317 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC12.29□□□□□ -0.44
Ubqln1Q8R317 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ubqln1Q8R317 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ubqln1Q8R317 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ubqln1Q8R317 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ubqln1Q8R317 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC12.29□□□□□ -0.44
Ubqln1Q8R317 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ubqln1Q8R317 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC12.29□□□□□ -0.44
Ubqln1Q8R317 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ubqln1Q8R317 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC12.29□□□□□ -0.44
Ubqln1Q8R317 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Ubqln1Q8R317 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Ubqln1Q8R317 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC12.29□□□□□ -0.44
Ubqln1Q8R317 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Ubqln1Q8R317 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Ubqln1Q8R317 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC12.29□□□□□ -0.44
Ubqln1Q8R317 Proscos-202ENSMUST00000178990 666 ntBASIC12.29□□□□□ -0.44
Ubqln1Q8R317 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Ubqln1Q8R317 Gm27486-201ENSMUST00000184923 80 ntBASIC12.29□□□□□ -0.44
Ubqln1Q8R317 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC12.29□□□□□ -0.44
Ubqln1Q8R317 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Ubqln1Q8R317 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC12.29□□□□□ -0.44
Ubqln1Q8R317 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC12.29□□□□□ -0.44
Ubqln1Q8R317 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC12.29□□□□□ -0.44
Ubqln1Q8R317 Gm8598-201ENSMUST00000221184 836 ntBASIC12.29□□□□□ -0.44
Ubqln1Q8R317 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC12.29□□□□□ -0.44
Ubqln1Q8R317 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ubqln1Q8R317 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Ubqln1Q8R317 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ubqln1Q8R317 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Ubqln1Q8R317 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ubqln1Q8R317 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ubqln1Q8R317 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ubqln1Q8R317 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC12.29□□□□□ -0.44
Ubqln1Q8R317 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ubqln1Q8R317 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ubqln1Q8R317 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ubqln1Q8R317 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ubqln1Q8R317 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ubqln1Q8R317 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC12.29□□□□□ -0.44
Ubqln1Q8R317 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ubqln1Q8R317 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ubqln1Q8R317 Gm44241-201ENSMUST00000203230 1662 ntBASIC12.29□□□□□ -0.44
Ubqln1Q8R317 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ubqln1Q8R317 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ubqln1Q8R317 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Ubqln1Q8R317 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Ubqln1Q8R317 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ubqln1Q8R317 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ubqln1Q8R317 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Ubqln1Q8R317 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Ubqln1Q8R317 Gm7002-201ENSMUST00000221386 2165 ntBASIC12.28□□□□□ -0.44
Ubqln1Q8R317 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ubqln1Q8R317 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ubqln1Q8R317 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Ubqln1Q8R317 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ubqln1Q8R317 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Ubqln1Q8R317 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC12.28□□□□□ -0.44
Ubqln1Q8R317 Gm38297-201ENSMUST00000195122 1057 ntBASIC12.28□□□□□ -0.44
Ubqln1Q8R317 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC12.28□□□□□ -0.44
Ubqln1Q8R317 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ubqln1Q8R317 Gm6458-201ENSMUST00000211573 635 ntBASIC12.28□□□□□ -0.44
Ubqln1Q8R317 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC12.28□□□□□ -0.44
Ubqln1Q8R317 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ubqln1Q8R317 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ubqln1Q8R317 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ubqln1Q8R317 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC12.28□□□□□ -0.44
Ubqln1Q8R317 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ubqln1Q8R317 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC12.28□□□□□ -0.44
Ubqln1Q8R317 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ubqln1Q8R317 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ubqln1Q8R317 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ubqln1Q8R317 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ubqln1Q8R317 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Ubqln1Q8R317 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ubqln1Q8R317 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ubqln1Q8R317 AC101945.2-201ENSMUST00000227886 1377 ntBASIC12.28□□□□□ -0.44
Ubqln1Q8R317 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ubqln1Q8R317 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ubqln1Q8R317 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ubqln1Q8R317 Rubie-203ENSMUST00000227803 2430 ntBASIC12.28□□□□□ -0.44
Ubqln1Q8R317 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ubqln1Q8R317 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ubqln1Q8R317 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Ubqln1Q8R317 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Ubqln1Q8R317 Gm44414-201ENSMUST00000203660 2109 ntBASIC12.28□□□□□ -0.44
Ubqln1Q8R317 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ubqln1Q8R317 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC12.28□□□□□ -0.44
Ubqln1Q8R317 Gm7114-201ENSMUST00000190159 1789 ntBASIC12.28□□□□□ -0.44
Ubqln1Q8R317 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Ubqln1Q8R317 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ubqln1Q8R317 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC12.28□□□□□ -0.44
Ubqln1Q8R317 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ubqln1Q8R317 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
Ubqln1Q8R317 Gm45643-201ENSMUST00000211364 1484 ntBASIC12.27□□□□□ -0.44
Ubqln1Q8R317 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC12.27□□□□□ -0.44
Ubqln1Q8R317 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Ubqln1Q8R317 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 44 ms