Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ddx54Q8K4L0 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Ddx54Q8K4L0 Tulp2-202ENSMUST00000085331 1525 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Ddx54Q8K4L0 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ddx54Q8K4L0 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ddx54Q8K4L0 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ddx54Q8K4L0 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ddx54Q8K4L0 Gm43697-201ENSMUST00000199637 2581 ntBASIC16.82■□□□□ 0.28
Ddx54Q8K4L0 Pmp22-202ENSMUST00000108700 733 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ddx54Q8K4L0 Rfc4-202ENSMUST00000115337 416 ntTSL 5 BASIC16.82■□□□□ 0.28
Ddx54Q8K4L0 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Ddx54Q8K4L0 Gm17889-201ENSMUST00000198410 598 ntBASIC16.82■□□□□ 0.28
Ddx54Q8K4L0 Gm9132-201ENSMUST00000210182 832 ntBASIC16.82■□□□□ 0.28
Ddx54Q8K4L0 Gm39404-201ENSMUST00000216350 313 ntBASIC16.82■□□□□ 0.28
Ddx54Q8K4L0 Gm18974-201ENSMUST00000221478 1031 ntBASIC16.82■□□□□ 0.28
Ddx54Q8K4L0 Ngdn-201ENSMUST00000022815 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ddx54Q8K4L0 Prrxl1-205ENSMUST00000228878 723 ntBASIC16.82■□□□□ 0.28
Ddx54Q8K4L0 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ddx54Q8K4L0 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ddx54Q8K4L0 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ddx54Q8K4L0 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Ddx54Q8K4L0 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ddx54Q8K4L0 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC16.82■□□□□ 0.28
Ddx54Q8K4L0 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ddx54Q8K4L0 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Ddx54Q8K4L0 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Ddx54Q8K4L0 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ddx54Q8K4L0 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ddx54Q8K4L0 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ddx54Q8K4L0 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ddx54Q8K4L0 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ddx54Q8K4L0 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ddx54Q8K4L0 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ddx54Q8K4L0 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Ddx54Q8K4L0 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ddx54Q8K4L0 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
Ddx54Q8K4L0 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Ddx54Q8K4L0 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC16.81■□□□□ 0.28
Ddx54Q8K4L0 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Ddx54Q8K4L0 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC16.81■□□□□ 0.28
Ddx54Q8K4L0 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ddx54Q8K4L0 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Ddx54Q8K4L0 Ppil6-201ENSMUST00000105507 1068 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ddx54Q8K4L0 Gm7851-201ENSMUST00000117574 323 ntBASIC16.81■□□□□ 0.28
Ddx54Q8K4L0 Gm15881-201ENSMUST00000148792 942 ntBASIC16.81■□□□□ 0.28
Ddx54Q8K4L0 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC16.81■□□□□ 0.28
Ddx54Q8K4L0 Rmrp-201ENSMUST00000157463 271 ntBASIC16.81■□□□□ 0.28
Ddx54Q8K4L0 4930405N21Rik-201ENSMUST00000199950 1200 ntBASIC16.81■□□□□ 0.28
Ddx54Q8K4L0 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ddx54Q8K4L0 Gm9463-201ENSMUST00000206707 601 ntBASIC16.81■□□□□ 0.28
Ddx54Q8K4L0 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC16.81■□□□□ 0.28
Ddx54Q8K4L0 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
Ddx54Q8K4L0 CT485607.1-201ENSMUST00000216100 85 ntBASIC16.81■□□□□ 0.28
Ddx54Q8K4L0 CT009713.8-201ENSMUST00000225448 560 ntBASIC16.81■□□□□ 0.28
Ddx54Q8K4L0 AL732506.1-201ENSMUST00000226420 281 ntBASIC16.81■□□□□ 0.28
Ddx54Q8K4L0 Ginm1-202ENSMUST00000065124 300 ntBASIC16.81■□□□□ 0.28
Ddx54Q8K4L0 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ddx54Q8K4L0 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ddx54Q8K4L0 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ddx54Q8K4L0 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ddx54Q8K4L0 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ddx54Q8K4L0 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ddx54Q8K4L0 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ddx54Q8K4L0 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Ddx54Q8K4L0 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Ddx54Q8K4L0 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ddx54Q8K4L0 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ddx54Q8K4L0 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Ddx54Q8K4L0 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ddx54Q8K4L0 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ddx54Q8K4L0 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ddx54Q8K4L0 Gnrhr-202ENSMUST00000094654 1475 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Ddx54Q8K4L0 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ddx54Q8K4L0 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ddx54Q8K4L0 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ddx54Q8K4L0 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Ddx54Q8K4L0 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ddx54Q8K4L0 Gm16347-202ENSMUST00000149000 772 ntTSL 3 BASIC16.8■□□□□ 0.28
Ddx54Q8K4L0 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC16.8■□□□□ 0.28
Ddx54Q8K4L0 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
Ddx54Q8K4L0 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Ddx54Q8K4L0 Gm44593-201ENSMUST00000208372 1249 ntTSL 5 BASIC16.8■□□□□ 0.28
Ddx54Q8K4L0 Gm6145-204ENSMUST00000210902 1266 ntTSL 5 BASIC16.8■□□□□ 0.28
Ddx54Q8K4L0 Gm4797-201ENSMUST00000219075 1283 ntBASIC16.8■□□□□ 0.28
Ddx54Q8K4L0 AC133602.1-201ENSMUST00000227510 509 ntBASIC16.8■□□□□ 0.28
Ddx54Q8K4L0 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ddx54Q8K4L0 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ddx54Q8K4L0 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ddx54Q8K4L0 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Ddx54Q8K4L0 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ddx54Q8K4L0 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Ddx54Q8K4L0 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ddx54Q8K4L0 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC16.8■□□□□ 0.28
Ddx54Q8K4L0 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ddx54Q8K4L0 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ddx54Q8K4L0 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ddx54Q8K4L0 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ddx54Q8K4L0 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ddx54Q8K4L0 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Ddx54Q8K4L0 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 43.7 ms