Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cchcr1Q8K2I2 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cchcr1Q8K2I2 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cchcr1Q8K2I2 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Cchcr1Q8K2I2 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC15.31■□□□□ 0.04
Cchcr1Q8K2I2 Gm42840-201ENSMUST00000200303 2251 ntBASIC15.31■□□□□ 0.04
Cchcr1Q8K2I2 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Cchcr1Q8K2I2 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cchcr1Q8K2I2 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cchcr1Q8K2I2 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Cchcr1Q8K2I2 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cchcr1Q8K2I2 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cchcr1Q8K2I2 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Cchcr1Q8K2I2 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
Cchcr1Q8K2I2 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Cchcr1Q8K2I2 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cchcr1Q8K2I2 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cchcr1Q8K2I2 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Cchcr1Q8K2I2 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC15.3■□□□□ 0.04
Cchcr1Q8K2I2 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC15.3■□□□□ 0.04
Cchcr1Q8K2I2 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Cchcr1Q8K2I2 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cchcr1Q8K2I2 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cchcr1Q8K2I2 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cchcr1Q8K2I2 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cchcr1Q8K2I2 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Cchcr1Q8K2I2 Auts2-212ENSMUST00000178555 309 ntBASIC15.3■□□□□ 0.04
Cchcr1Q8K2I2 Gm9061-201ENSMUST00000182707 1006 ntBASIC15.3■□□□□ 0.04
Cchcr1Q8K2I2 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cchcr1Q8K2I2 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Cchcr1Q8K2I2 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC15.3■□□□□ 0.04
Cchcr1Q8K2I2 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC15.3■□□□□ 0.04
Cchcr1Q8K2I2 Gm38049-201ENSMUST00000195698 1372 ntBASIC15.3■□□□□ 0.04
Cchcr1Q8K2I2 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cchcr1Q8K2I2 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC15.3■□□□□ 0.04
Cchcr1Q8K2I2 AC158982.1-201ENSMUST00000228377 901 ntBASIC15.3■□□□□ 0.04
Cchcr1Q8K2I2 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cchcr1Q8K2I2 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cchcr1Q8K2I2 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cchcr1Q8K2I2 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Cchcr1Q8K2I2 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cchcr1Q8K2I2 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cchcr1Q8K2I2 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cchcr1Q8K2I2 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cchcr1Q8K2I2 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Cchcr1Q8K2I2 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cchcr1Q8K2I2 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cchcr1Q8K2I2 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Cchcr1Q8K2I2 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Cchcr1Q8K2I2 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cchcr1Q8K2I2 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cchcr1Q8K2I2 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cchcr1Q8K2I2 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cchcr1Q8K2I2 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cchcr1Q8K2I2 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
Cchcr1Q8K2I2 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cchcr1Q8K2I2 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cchcr1Q8K2I2 Gm44241-201ENSMUST00000203230 1662 ntBASIC15.29■□□□□ 0.04
Cchcr1Q8K2I2 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cchcr1Q8K2I2 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Cchcr1Q8K2I2 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Cchcr1Q8K2I2 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cchcr1Q8K2I2 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cchcr1Q8K2I2 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cchcr1Q8K2I2 Gm5866-201ENSMUST00000177881 973 ntBASIC15.29■□□□□ 0.04
Cchcr1Q8K2I2 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Cchcr1Q8K2I2 Gm27701-201ENSMUST00000184498 110 ntBASIC15.29■□□□□ 0.04
Cchcr1Q8K2I2 AC135669.1-201ENSMUST00000213585 412 ntBASIC15.29■□□□□ 0.04
Cchcr1Q8K2I2 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
Cchcr1Q8K2I2 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cchcr1Q8K2I2 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cchcr1Q8K2I2 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cchcr1Q8K2I2 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Cchcr1Q8K2I2 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cchcr1Q8K2I2 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cchcr1Q8K2I2 AC159195.1-201ENSMUST00000225867 2086 ntBASIC15.29■□□□□ 0.04
Cchcr1Q8K2I2 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cchcr1Q8K2I2 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cchcr1Q8K2I2 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cchcr1Q8K2I2 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC15.29■□□□□ 0.04
Cchcr1Q8K2I2 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cchcr1Q8K2I2 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cchcr1Q8K2I2 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cchcr1Q8K2I2 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cchcr1Q8K2I2 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Cchcr1Q8K2I2 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cchcr1Q8K2I2 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cchcr1Q8K2I2 Gm20633-201ENSMUST00000176742 2831 ntBASIC15.28■□□□□ 0.04
Cchcr1Q8K2I2 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cchcr1Q8K2I2 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Cchcr1Q8K2I2 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cchcr1Q8K2I2 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cchcr1Q8K2I2 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC15.28■□□□□ 0.04
Cchcr1Q8K2I2 AC154262.2-202ENSMUST00000225158 1331 ntBASIC15.28■□□□□ 0.04
Cchcr1Q8K2I2 Gm6210-201ENSMUST00000204734 1942 ntBASIC15.28■□□□□ 0.04
Cchcr1Q8K2I2 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Cchcr1Q8K2I2 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC15.28■□□□□ 0.04
Cchcr1Q8K2I2 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC15.28■□□□□ 0.04
Cchcr1Q8K2I2 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Cchcr1Q8K2I2 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC15.28■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 52.9 ms