Protein–RNA interactions for Protein: Q8CII8

Syne4, Nesprin-4, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne4Q8CII8 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Syne4Q8CII8 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Syne4Q8CII8 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC14.6□□□□□ -0.07
Syne4Q8CII8 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Syne4Q8CII8 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Syne4Q8CII8 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Syne4Q8CII8 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Syne4Q8CII8 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC14.6□□□□□ -0.07
Syne4Q8CII8 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Syne4Q8CII8 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Syne4Q8CII8 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Syne4Q8CII8 Rbpsuh-rs3-201ENSMUST00000182751 1441 ntBASIC14.59□□□□□ -0.07
Syne4Q8CII8 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Syne4Q8CII8 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Syne4Q8CII8 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC14.59□□□□□ -0.07
Syne4Q8CII8 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Syne4Q8CII8 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Syne4Q8CII8 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Syne4Q8CII8 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Syne4Q8CII8 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Syne4Q8CII8 Gm9062-201ENSMUST00000117712 727 ntBASIC14.59□□□□□ -0.07
Syne4Q8CII8 Gm14832-201ENSMUST00000121289 322 ntBASIC14.59□□□□□ -0.07
Syne4Q8CII8 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Syne4Q8CII8 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Syne4Q8CII8 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Syne4Q8CII8 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC14.59□□□□□ -0.07
Syne4Q8CII8 Gm38139-201ENSMUST00000195806 704 ntTSL 2 BASIC14.59□□□□□ -0.07
Syne4Q8CII8 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC14.59□□□□□ -0.07
Syne4Q8CII8 AC131330.1-201ENSMUST00000227814 1015 ntBASIC14.59□□□□□ -0.07
Syne4Q8CII8 Cryab-201ENSMUST00000034562 946 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Syne4Q8CII8 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
Syne4Q8CII8 Mir339-201ENSMUST00000083659 96 ntBASIC14.59□□□□□ -0.07
Syne4Q8CII8 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Syne4Q8CII8 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Syne4Q8CII8 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Syne4Q8CII8 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Syne4Q8CII8 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Syne4Q8CII8 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
Syne4Q8CII8 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Syne4Q8CII8 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC14.58□□□□□ -0.07
Syne4Q8CII8 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.07
Syne4Q8CII8 AC159649.2-201ENSMUST00000222984 3223 ntBASIC14.58□□□□□ -0.07
Syne4Q8CII8 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.07
Syne4Q8CII8 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC14.58□□□□□ -0.07
Syne4Q8CII8 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Syne4Q8CII8 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC14.58□□□□□ -0.08
Syne4Q8CII8 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Syne4Q8CII8 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Syne4Q8CII8 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Syne4Q8CII8 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Syne4Q8CII8 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Syne4Q8CII8 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Syne4Q8CII8 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Syne4Q8CII8 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Syne4Q8CII8 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Syne4Q8CII8 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC14.58□□□□□ -0.08
Syne4Q8CII8 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Syne4Q8CII8 Gm6335-201ENSMUST00000118081 1194 ntBASIC14.58□□□□□ -0.08
Syne4Q8CII8 Gm14921-201ENSMUST00000118643 908 ntBASIC14.58□□□□□ -0.08
Syne4Q8CII8 Gm7816-201ENSMUST00000119884 1194 ntBASIC14.58□□□□□ -0.08
Syne4Q8CII8 Gm15542-201ENSMUST00000121585 1194 ntBASIC14.58□□□□□ -0.08
Syne4Q8CII8 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Syne4Q8CII8 Smim22-207ENSMUST00000184439 382 ntAPPRIS P3 TSL 2 BASIC14.58□□□□□ -0.08
Syne4Q8CII8 Gm29087-201ENSMUST00000186462 645 ntTSL 5 BASIC14.58□□□□□ -0.08
Syne4Q8CII8 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC14.58□□□□□ -0.08
Syne4Q8CII8 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC14.58□□□□□ -0.08
Syne4Q8CII8 Gm7848-201ENSMUST00000210739 718 ntBASIC14.58□□□□□ -0.08
Syne4Q8CII8 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC14.58□□□□□ -0.08
Syne4Q8CII8 1700027J07Rik-202ENSMUST00000215747 1060 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Syne4Q8CII8 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Syne4Q8CII8 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Syne4Q8CII8 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Syne4Q8CII8 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Syne4Q8CII8 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Syne4Q8CII8 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Syne4Q8CII8 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
Syne4Q8CII8 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC14.58□□□□□ -0.08
Syne4Q8CII8 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC14.58□□□□□ -0.08
Syne4Q8CII8 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Syne4Q8CII8 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Syne4Q8CII8 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Syne4Q8CII8 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Syne4Q8CII8 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Syne4Q8CII8 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Syne4Q8CII8 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC14.57□□□□□ -0.08
Syne4Q8CII8 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC14.57□□□□□ -0.08
Syne4Q8CII8 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Syne4Q8CII8 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Syne4Q8CII8 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Syne4Q8CII8 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Syne4Q8CII8 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Syne4Q8CII8 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Syne4Q8CII8 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Syne4Q8CII8 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Syne4Q8CII8 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC14.57□□□□□ -0.08
Syne4Q8CII8 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Syne4Q8CII8 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Syne4Q8CII8 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Syne4Q8CII8 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Syne4Q8CII8 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 8.4 ms