Protein–RNA interactions for Protein: Q8CIE6

Copa, Coatomer subunit alpha, mousemouse

Known RBP Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopaQ8CIE6 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CopaQ8CIE6 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CopaQ8CIE6 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
CopaQ8CIE6 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
CopaQ8CIE6 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CopaQ8CIE6 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
CopaQ8CIE6 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
CopaQ8CIE6 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
CopaQ8CIE6 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CopaQ8CIE6 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CopaQ8CIE6 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
CopaQ8CIE6 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CopaQ8CIE6 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CopaQ8CIE6 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CopaQ8CIE6 Gm8213-201ENSMUST00000118191 441 ntBASIC13.24□□□□□ -0.29
CopaQ8CIE6 Gm16177-201ENSMUST00000120728 718 ntBASIC13.24□□□□□ -0.29
CopaQ8CIE6 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC13.24□□□□□ -0.29
CopaQ8CIE6 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC13.24□□□□□ -0.29
CopaQ8CIE6 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC13.24□□□□□ -0.29
CopaQ8CIE6 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC13.24□□□□□ -0.29
CopaQ8CIE6 AC155237.1-201ENSMUST00000226196 1279 ntBASIC13.24□□□□□ -0.29
CopaQ8CIE6 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
CopaQ8CIE6 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CopaQ8CIE6 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CopaQ8CIE6 Rn7sk-201ENSMUST00000083103 331 ntBASIC13.24□□□□□ -0.29
CopaQ8CIE6 Gm26315-201ENSMUST00000083890 321 ntBASIC13.24□□□□□ -0.29
CopaQ8CIE6 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
CopaQ8CIE6 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
CopaQ8CIE6 Gm43463-201ENSMUST00000195967 1803 ntBASIC13.24□□□□□ -0.29
CopaQ8CIE6 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CopaQ8CIE6 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CopaQ8CIE6 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CopaQ8CIE6 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
CopaQ8CIE6 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC13.24□□□□□ -0.29
CopaQ8CIE6 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
CopaQ8CIE6 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CopaQ8CIE6 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CopaQ8CIE6 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
CopaQ8CIE6 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CopaQ8CIE6 Gm7553-201ENSMUST00000185805 1426 ntBASIC13.23□□□□□ -0.29
CopaQ8CIE6 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
CopaQ8CIE6 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CopaQ8CIE6 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
CopaQ8CIE6 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
CopaQ8CIE6 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CopaQ8CIE6 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CopaQ8CIE6 Gm9755-201ENSMUST00000032981 1356 ntBASIC13.23□□□□□ -0.29
CopaQ8CIE6 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CopaQ8CIE6 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
CopaQ8CIE6 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
CopaQ8CIE6 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
CopaQ8CIE6 Sgk1-213ENSMUST00000164659 2602 ntTSL 5 BASIC13.23□□□□□ -0.29
CopaQ8CIE6 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
CopaQ8CIE6 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CopaQ8CIE6 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CopaQ8CIE6 Gm23931-201ENSMUST00000103842 109 ntBASIC13.23□□□□□ -0.29
CopaQ8CIE6 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CopaQ8CIE6 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
CopaQ8CIE6 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
CopaQ8CIE6 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
CopaQ8CIE6 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC13.23□□□□□ -0.29
CopaQ8CIE6 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC13.23□□□□□ -0.29
CopaQ8CIE6 Gm17420-201ENSMUST00000164753 153 ntBASIC13.23□□□□□ -0.29
CopaQ8CIE6 Gm27331-201ENSMUST00000183705 60 ntBASIC13.23□□□□□ -0.29
CopaQ8CIE6 Gm42693-201ENSMUST00000196779 631 ntBASIC13.23□□□□□ -0.29
CopaQ8CIE6 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CopaQ8CIE6 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CopaQ8CIE6 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
CopaQ8CIE6 Gm10478-201ENSMUST00000084451 396 ntBASIC13.23□□□□□ -0.29
CopaQ8CIE6 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CopaQ8CIE6 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CopaQ8CIE6 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC13.23□□□□□ -0.29
CopaQ8CIE6 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC13.23□□□□□ -0.29
CopaQ8CIE6 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CopaQ8CIE6 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CopaQ8CIE6 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CopaQ8CIE6 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CopaQ8CIE6 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CopaQ8CIE6 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CopaQ8CIE6 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CopaQ8CIE6 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CopaQ8CIE6 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC13.23□□□□□ -0.29
CopaQ8CIE6 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CopaQ8CIE6 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CopaQ8CIE6 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC13.23□□□□□ -0.29
CopaQ8CIE6 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC13.23□□□□□ -0.29
CopaQ8CIE6 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CopaQ8CIE6 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC13.23□□□□□ -0.29
CopaQ8CIE6 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
CopaQ8CIE6 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CopaQ8CIE6 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
CopaQ8CIE6 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CopaQ8CIE6 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
CopaQ8CIE6 AC137842.1-201ENSMUST00000227896 2064 ntBASIC13.22□□□□□ -0.29
CopaQ8CIE6 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CopaQ8CIE6 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CopaQ8CIE6 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
CopaQ8CIE6 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC13.22□□□□□ -0.29
CopaQ8CIE6 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC13.22□□□□□ -0.29
CopaQ8CIE6 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 62 ms