Protein–RNA interactions for Protein: Q8CG46

Smc5, Structural maintenance of chromosomes protein 5, mousemouse

Known RBP Predictions only

Length 1,101 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc5Q8CG46 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Smc5Q8CG46 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC16■□□□□ 0.15
Smc5Q8CG46 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Smc5Q8CG46 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC16■□□□□ 0.15
Smc5Q8CG46 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Smc5Q8CG46 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC16■□□□□ 0.15
Smc5Q8CG46 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC16■□□□□ 0.15
Smc5Q8CG46 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC16■□□□□ 0.15
Smc5Q8CG46 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Smc5Q8CG46 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC16■□□□□ 0.15
Smc5Q8CG46 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC16■□□□□ 0.15
Smc5Q8CG46 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
Smc5Q8CG46 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC15.99■□□□□ 0.15
Smc5Q8CG46 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Smc5Q8CG46 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Smc5Q8CG46 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC15.99■□□□□ 0.15
Smc5Q8CG46 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Smc5Q8CG46 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC15.99■□□□□ 0.15
Smc5Q8CG46 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Smc5Q8CG46 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Smc5Q8CG46 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Smc5Q8CG46 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC15.99■□□□□ 0.15
Smc5Q8CG46 Gm16215-201ENSMUST00000161990 637 ntBASIC15.99■□□□□ 0.15
Smc5Q8CG46 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC15.99■□□□□ 0.15
Smc5Q8CG46 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC15.99■□□□□ 0.15
Smc5Q8CG46 Gm28693-202ENSMUST00000190758 331 ntBASIC15.99■□□□□ 0.15
Smc5Q8CG46 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Smc5Q8CG46 Ighv8-10-201ENSMUST00000199579 358 ntBASIC15.99■□□□□ 0.15
Smc5Q8CG46 Gm6458-201ENSMUST00000211573 635 ntBASIC15.99■□□□□ 0.15
Smc5Q8CG46 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC15.99■□□□□ 0.15
Smc5Q8CG46 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
Smc5Q8CG46 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
Smc5Q8CG46 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Smc5Q8CG46 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Smc5Q8CG46 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC15.99■□□□□ 0.15
Smc5Q8CG46 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Smc5Q8CG46 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Smc5Q8CG46 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Smc5Q8CG46 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Smc5Q8CG46 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
Smc5Q8CG46 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Smc5Q8CG46 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Smc5Q8CG46 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Smc5Q8CG46 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
Smc5Q8CG46 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Smc5Q8CG46 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
Smc5Q8CG46 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Smc5Q8CG46 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Smc5Q8CG46 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
Smc5Q8CG46 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Smc5Q8CG46 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Smc5Q8CG46 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
Smc5Q8CG46 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Smc5Q8CG46 Gm7224-201ENSMUST00000121359 2066 ntBASIC15.98■□□□□ 0.15
Smc5Q8CG46 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Smc5Q8CG46 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
Smc5Q8CG46 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC15.98■□□□□ 0.15
Smc5Q8CG46 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Smc5Q8CG46 Mir7023-201ENSMUST00000185093 64 ntBASIC15.98■□□□□ 0.15
Smc5Q8CG46 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Smc5Q8CG46 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Smc5Q8CG46 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Smc5Q8CG46 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Smc5Q8CG46 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC15.98■□□□□ 0.15
Smc5Q8CG46 CT009713.10-201ENSMUST00000225013 1986 ntBASIC15.98■□□□□ 0.15
Smc5Q8CG46 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Smc5Q8CG46 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Smc5Q8CG46 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Smc5Q8CG46 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
Smc5Q8CG46 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Smc5Q8CG46 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Smc5Q8CG46 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Smc5Q8CG46 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC15.97■□□□□ 0.15
Smc5Q8CG46 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Smc5Q8CG46 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Smc5Q8CG46 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Smc5Q8CG46 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Smc5Q8CG46 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
Smc5Q8CG46 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Smc5Q8CG46 Gm15429-201ENSMUST00000151268 798 ntBASIC15.97■□□□□ 0.15
Smc5Q8CG46 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
Smc5Q8CG46 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC15.97■□□□□ 0.15
Smc5Q8CG46 Gm2495-201ENSMUST00000191160 466 ntBASIC15.97■□□□□ 0.15
Smc5Q8CG46 Gm5276-201ENSMUST00000196683 1047 ntBASIC15.97■□□□□ 0.15
Smc5Q8CG46 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC15.97■□□□□ 0.15
Smc5Q8CG46 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Smc5Q8CG46 Gm5053-201ENSMUST00000208361 1678 ntBASIC15.97■□□□□ 0.15
Smc5Q8CG46 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
Smc5Q8CG46 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Smc5Q8CG46 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Smc5Q8CG46 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Smc5Q8CG46 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Smc5Q8CG46 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC15.97■□□□□ 0.15
Smc5Q8CG46 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Smc5Q8CG46 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Smc5Q8CG46 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Smc5Q8CG46 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Smc5Q8CG46 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
Smc5Q8CG46 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Smc5Q8CG46 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 42.1 ms