Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Nup88Q8CEC0 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Nup88Q8CEC0 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nup88Q8CEC0 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC15.28■□□□□ 0.04
Nup88Q8CEC0 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nup88Q8CEC0 Gm23931-201ENSMUST00000103842 109 ntBASIC15.28■□□□□ 0.04
Nup88Q8CEC0 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Nup88Q8CEC0 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC15.28■□□□□ 0.04
Nup88Q8CEC0 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC15.28■□□□□ 0.04
Nup88Q8CEC0 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Nup88Q8CEC0 Gm9124-201ENSMUST00000191789 1092 ntBASIC15.28■□□□□ 0.04
Nup88Q8CEC0 Gm9113-201ENSMUST00000192510 1018 ntBASIC15.28■□□□□ 0.04
Nup88Q8CEC0 Gm9131-201ENSMUST00000193557 1089 ntBASIC15.28■□□□□ 0.04
Nup88Q8CEC0 Gm9121-201ENSMUST00000193749 1071 ntBASIC15.28■□□□□ 0.04
Nup88Q8CEC0 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC15.28■□□□□ 0.04
Nup88Q8CEC0 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC15.28■□□□□ 0.04
Nup88Q8CEC0 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nup88Q8CEC0 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nup88Q8CEC0 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nup88Q8CEC0 Gm8399-201ENSMUST00000082300 1117 ntBASIC15.28■□□□□ 0.04
Nup88Q8CEC0 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Nup88Q8CEC0 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Nup88Q8CEC0 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nup88Q8CEC0 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Nup88Q8CEC0 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nup88Q8CEC0 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nup88Q8CEC0 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nup88Q8CEC0 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC15.28■□□□□ 0.04
Nup88Q8CEC0 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nup88Q8CEC0 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nup88Q8CEC0 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
Nup88Q8CEC0 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nup88Q8CEC0 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nup88Q8CEC0 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nup88Q8CEC0 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nup88Q8CEC0 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC15.28■□□□□ 0.04
Nup88Q8CEC0 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Nup88Q8CEC0 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Nup88Q8CEC0 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC15.27■□□□□ 0.04
Nup88Q8CEC0 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Nup88Q8CEC0 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Nup88Q8CEC0 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Nup88Q8CEC0 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Nup88Q8CEC0 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Nup88Q8CEC0 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Nup88Q8CEC0 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Nup88Q8CEC0 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Nup88Q8CEC0 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Nup88Q8CEC0 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC15.27■□□□□ 0.04
Nup88Q8CEC0 Gm10156-201ENSMUST00000122364 462 ntBASIC15.27■□□□□ 0.04
Nup88Q8CEC0 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC15.27■□□□□ 0.04
Nup88Q8CEC0 Gm6152-201ENSMUST00000151704 340 ntBASIC15.27■□□□□ 0.04
Nup88Q8CEC0 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC15.27■□□□□ 0.04
Nup88Q8CEC0 Gm22331-201ENSMUST00000158066 136 ntBASIC15.27■□□□□ 0.04
Nup88Q8CEC0 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Nup88Q8CEC0 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC15.27■□□□□ 0.04
Nup88Q8CEC0 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Nup88Q8CEC0 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC15.27■□□□□ 0.04
Nup88Q8CEC0 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC15.27■□□□□ 0.04
Nup88Q8CEC0 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Nup88Q8CEC0 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Nup88Q8CEC0 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Nup88Q8CEC0 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Nup88Q8CEC0 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Nup88Q8CEC0 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
Nup88Q8CEC0 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
Nup88Q8CEC0 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.03
Nup88Q8CEC0 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Nup88Q8CEC0 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Nup88Q8CEC0 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Nup88Q8CEC0 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC15.27■□□□□ 0.03
Nup88Q8CEC0 Gm42863-201ENSMUST00000197875 2958 ntBASIC15.27■□□□□ 0.03
Nup88Q8CEC0 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Nup88Q8CEC0 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Nup88Q8CEC0 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
Nup88Q8CEC0 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Nup88Q8CEC0 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
Nup88Q8CEC0 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC15.26■□□□□ 0.03
Nup88Q8CEC0 Gm38385-201ENSMUST00000194454 2351 ntBASIC15.26■□□□□ 0.03
Nup88Q8CEC0 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Nup88Q8CEC0 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nup88Q8CEC0 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nup88Q8CEC0 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Nup88Q8CEC0 Gm13886-201ENSMUST00000117876 1183 ntBASIC15.26■□□□□ 0.03
Nup88Q8CEC0 Gm8213-201ENSMUST00000118191 441 ntBASIC15.26■□□□□ 0.03
Nup88Q8CEC0 Gm16177-201ENSMUST00000120728 718 ntBASIC15.26■□□□□ 0.03
Nup88Q8CEC0 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC15.26■□□□□ 0.03
Nup88Q8CEC0 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC15.26■□□□□ 0.03
Nup88Q8CEC0 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC15.26■□□□□ 0.03
Nup88Q8CEC0 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Nup88Q8CEC0 Proscos-202ENSMUST00000178990 666 ntBASIC15.26■□□□□ 0.03
Nup88Q8CEC0 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Nup88Q8CEC0 Gm27514-201ENSMUST00000183692 110 ntBASIC15.26■□□□□ 0.03
Nup88Q8CEC0 Gm43818-201ENSMUST00000200605 466 ntBASIC15.26■□□□□ 0.03
Nup88Q8CEC0 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC15.26■□□□□ 0.03
Nup88Q8CEC0 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nup88Q8CEC0 Gm17330-201ENSMUST00000221047 165 ntBASIC15.26■□□□□ 0.03
Nup88Q8CEC0 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Nup88Q8CEC0 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nup88Q8CEC0 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms