Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim9Q8C7M3 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim9Q8C7M3 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim9Q8C7M3 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC14.28□□□□□ -0.12
Trim9Q8C7M3 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim9Q8C7M3 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim9Q8C7M3 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Trim9Q8C7M3 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim9Q8C7M3 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Trim9Q8C7M3 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Trim9Q8C7M3 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trim9Q8C7M3 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trim9Q8C7M3 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trim9Q8C7M3 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
Trim9Q8C7M3 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC14.27□□□□□ -0.12
Trim9Q8C7M3 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trim9Q8C7M3 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trim9Q8C7M3 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trim9Q8C7M3 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC14.27□□□□□ -0.12
Trim9Q8C7M3 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC14.27□□□□□ -0.13
Trim9Q8C7M3 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Trim9Q8C7M3 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC14.27□□□□□ -0.13
Trim9Q8C7M3 Gm5896-201ENSMUST00000189662 1024 ntBASIC14.27□□□□□ -0.13
Trim9Q8C7M3 Gm42442-201ENSMUST00000197951 1133 ntBASIC14.27□□□□□ -0.13
Trim9Q8C7M3 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trim9Q8C7M3 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trim9Q8C7M3 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trim9Q8C7M3 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trim9Q8C7M3 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trim9Q8C7M3 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trim9Q8C7M3 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Trim9Q8C7M3 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trim9Q8C7M3 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trim9Q8C7M3 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim9Q8C7M3 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim9Q8C7M3 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trim9Q8C7M3 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trim9Q8C7M3 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim9Q8C7M3 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trim9Q8C7M3 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim9Q8C7M3 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
Trim9Q8C7M3 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim9Q8C7M3 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim9Q8C7M3 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Trim9Q8C7M3 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trim9Q8C7M3 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim9Q8C7M3 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim9Q8C7M3 Snord83b-201ENSMUST00000104546 94 ntBASIC14.26□□□□□ -0.13
Trim9Q8C7M3 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim9Q8C7M3 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim9Q8C7M3 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC14.26□□□□□ -0.13
Trim9Q8C7M3 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trim9Q8C7M3 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC14.26□□□□□ -0.13
Trim9Q8C7M3 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim9Q8C7M3 Gm43416-201ENSMUST00000201916 1015 ntBASIC14.26□□□□□ -0.13
Trim9Q8C7M3 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC14.26□□□□□ -0.13
Trim9Q8C7M3 Gm44772-201ENSMUST00000207623 1191 ntBASIC14.26□□□□□ -0.13
Trim9Q8C7M3 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim9Q8C7M3 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim9Q8C7M3 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trim9Q8C7M3 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC14.26□□□□□ -0.13
Trim9Q8C7M3 Mir339-201ENSMUST00000083659 96 ntBASIC14.26□□□□□ -0.13
Trim9Q8C7M3 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Trim9Q8C7M3 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Trim9Q8C7M3 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim9Q8C7M3 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trim9Q8C7M3 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trim9Q8C7M3 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim9Q8C7M3 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC14.26□□□□□ -0.13
Trim9Q8C7M3 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim9Q8C7M3 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim9Q8C7M3 Rnf17-202ENSMUST00000223627 2077 ntBASIC14.26□□□□□ -0.13
Trim9Q8C7M3 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim9Q8C7M3 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Trim9Q8C7M3 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim9Q8C7M3 AC123834.1-201ENSMUST00000225346 2043 ntBASIC14.25□□□□□ -0.13
Trim9Q8C7M3 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim9Q8C7M3 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim9Q8C7M3 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim9Q8C7M3 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim9Q8C7M3 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim9Q8C7M3 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
Trim9Q8C7M3 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim9Q8C7M3 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim9Q8C7M3 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim9Q8C7M3 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
Trim9Q8C7M3 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC14.25□□□□□ -0.13
Trim9Q8C7M3 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim9Q8C7M3 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Trim9Q8C7M3 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC14.25□□□□□ -0.13
Trim9Q8C7M3 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim9Q8C7M3 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC14.25□□□□□ -0.13
Trim9Q8C7M3 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC14.25□□□□□ -0.13
Trim9Q8C7M3 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC14.25□□□□□ -0.13
Trim9Q8C7M3 Gm44799-201ENSMUST00000207639 1202 ntBASIC14.25□□□□□ -0.13
Trim9Q8C7M3 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC14.25□□□□□ -0.13
Trim9Q8C7M3 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim9Q8C7M3 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim9Q8C7M3 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Trim9Q8C7M3 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms