Protein–RNA interactions for Protein: Q8C120

Sh3rf3, SH3 domain-containing RING finger protein 3, mousemouse

Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf3Q8C120 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sh3rf3Q8C120 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sh3rf3Q8C120 Ighv5-13-201ENSMUST00000193550 290 ntBASIC13.5□□□□□ -0.25
Sh3rf3Q8C120 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Sh3rf3Q8C120 Gm6458-201ENSMUST00000211573 635 ntBASIC13.5□□□□□ -0.25
Sh3rf3Q8C120 AC110817.1-201ENSMUST00000225706 605 ntBASIC13.5□□□□□ -0.25
Sh3rf3Q8C120 Gm10012-201ENSMUST00000078252 192 ntBASIC13.5□□□□□ -0.25
Sh3rf3Q8C120 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sh3rf3Q8C120 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sh3rf3Q8C120 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Sh3rf3Q8C120 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sh3rf3Q8C120 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Sh3rf3Q8C120 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sh3rf3Q8C120 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sh3rf3Q8C120 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Sh3rf3Q8C120 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sh3rf3Q8C120 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Sh3rf3Q8C120 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sh3rf3Q8C120 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC13.5□□□□□ -0.25
Sh3rf3Q8C120 Gm14608-201ENSMUST00000120030 1553 ntBASIC13.49□□□□□ -0.25
Sh3rf3Q8C120 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Sh3rf3Q8C120 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
Sh3rf3Q8C120 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sh3rf3Q8C120 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sh3rf3Q8C120 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sh3rf3Q8C120 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sh3rf3Q8C120 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sh3rf3Q8C120 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sh3rf3Q8C120 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC13.49□□□□□ -0.25
Sh3rf3Q8C120 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Sh3rf3Q8C120 Gm11618-201ENSMUST00000117946 267 ntBASIC13.49□□□□□ -0.25
Sh3rf3Q8C120 Gm10156-201ENSMUST00000122364 462 ntBASIC13.49□□□□□ -0.25
Sh3rf3Q8C120 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC13.49□□□□□ -0.25
Sh3rf3Q8C120 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC13.49□□□□□ -0.25
Sh3rf3Q8C120 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC13.49□□□□□ -0.25
Sh3rf3Q8C120 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC13.49□□□□□ -0.25
Sh3rf3Q8C120 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC13.49□□□□□ -0.25
Sh3rf3Q8C120 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC13.49□□□□□ -0.25
Sh3rf3Q8C120 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sh3rf3Q8C120 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
Sh3rf3Q8C120 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sh3rf3Q8C120 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sh3rf3Q8C120 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sh3rf3Q8C120 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sh3rf3Q8C120 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Sh3rf3Q8C120 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC13.49□□□□□ -0.25
Sh3rf3Q8C120 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sh3rf3Q8C120 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Sh3rf3Q8C120 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sh3rf3Q8C120 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sh3rf3Q8C120 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sh3rf3Q8C120 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sh3rf3Q8C120 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sh3rf3Q8C120 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Sh3rf3Q8C120 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC13.48□□□□□ -0.25
Sh3rf3Q8C120 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC13.48□□□□□ -0.25
Sh3rf3Q8C120 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC13.48□□□□□ -0.25
Sh3rf3Q8C120 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Sh3rf3Q8C120 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Sh3rf3Q8C120 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sh3rf3Q8C120 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sh3rf3Q8C120 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sh3rf3Q8C120 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sh3rf3Q8C120 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sh3rf3Q8C120 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Sh3rf3Q8C120 Rnf17-202ENSMUST00000223627 2077 ntBASIC13.48□□□□□ -0.25
Sh3rf3Q8C120 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC13.48□□□□□ -0.25
Sh3rf3Q8C120 Gm12203-201ENSMUST00000118235 598 ntBASIC13.48□□□□□ -0.25
Sh3rf3Q8C120 Gm13369-201ENSMUST00000119442 987 ntBASIC13.48□□□□□ -0.25
Sh3rf3Q8C120 Gm12209-201ENSMUST00000120089 596 ntBASIC13.48□□□□□ -0.25
Sh3rf3Q8C120 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC13.48□□□□□ -0.25
Sh3rf3Q8C120 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Sh3rf3Q8C120 Gm9002-201ENSMUST00000178437 499 ntBASIC13.48□□□□□ -0.25
Sh3rf3Q8C120 Gm27839-201ENSMUST00000184242 106 ntBASIC13.48□□□□□ -0.25
Sh3rf3Q8C120 Gm28693-202ENSMUST00000190758 331 ntBASIC13.48□□□□□ -0.25
Sh3rf3Q8C120 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Sh3rf3Q8C120 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC13.48□□□□□ -0.25
Sh3rf3Q8C120 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC13.48□□□□□ -0.25
Sh3rf3Q8C120 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sh3rf3Q8C120 Gm16372-201ENSMUST00000073088 450 ntBASIC13.48□□□□□ -0.25
Sh3rf3Q8C120 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Sh3rf3Q8C120 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Sh3rf3Q8C120 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sh3rf3Q8C120 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Sh3rf3Q8C120 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Sh3rf3Q8C120 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sh3rf3Q8C120 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sh3rf3Q8C120 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Sh3rf3Q8C120 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sh3rf3Q8C120 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Sh3rf3Q8C120 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Sh3rf3Q8C120 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC13.48□□□□□ -0.25
Sh3rf3Q8C120 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Sh3rf3Q8C120 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sh3rf3Q8C120 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sh3rf3Q8C120 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Sh3rf3Q8C120 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Sh3rf3Q8C120 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sh3rf3Q8C120 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Sh3rf3Q8C120 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 66.9 ms