Protein–RNA interactions for Protein: Q8BY87

Usp47, Ubiquitin carboxyl-terminal hydrolase 47, mousemouse

Predictions only

Length 1,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp47Q8BY87 Gm13394-201ENSMUST00000121658 1000 ntBASIC18.18■□□□□ 0.5
Usp47Q8BY87 Gm5597-201ENSMUST00000182353 1193 ntBASIC18.18■□□□□ 0.5
Usp47Q8BY87 Gm30285-201ENSMUST00000214614 422 ntBASIC18.18■□□□□ 0.5
Usp47Q8BY87 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC18.18■□□□□ 0.5
Usp47Q8BY87 Gm9257-201ENSMUST00000221254 232 ntBASIC18.18■□□□□ 0.5
Usp47Q8BY87 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Usp47Q8BY87 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC18.18■□□□□ 0.5
Usp47Q8BY87 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Usp47Q8BY87 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Usp47Q8BY87 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Usp47Q8BY87 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Usp47Q8BY87 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Usp47Q8BY87 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Usp47Q8BY87 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Usp47Q8BY87 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Usp47Q8BY87 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Usp47Q8BY87 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Usp47Q8BY87 Gm45643-201ENSMUST00000211364 1484 ntBASIC18.18■□□□□ 0.5
Usp47Q8BY87 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Usp47Q8BY87 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Usp47Q8BY87 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Usp47Q8BY87 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Usp47Q8BY87 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Usp47Q8BY87 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Usp47Q8BY87 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Usp47Q8BY87 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Usp47Q8BY87 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC18.18■□□□□ 0.5
Usp47Q8BY87 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC18.18■□□□□ 0.5
Usp47Q8BY87 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Usp47Q8BY87 Gm25043-201ENSMUST00000158604 212 ntBASIC18.17■□□□□ 0.5
Usp47Q8BY87 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC18.17■□□□□ 0.5
Usp47Q8BY87 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Usp47Q8BY87 Gm44364-201ENSMUST00000198368 141 ntBASIC18.17■□□□□ 0.5
Usp47Q8BY87 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Usp47Q8BY87 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Usp47Q8BY87 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC18.17■□□□□ 0.5
Usp47Q8BY87 Gm5950-201ENSMUST00000213337 772 ntBASIC18.17■□□□□ 0.5
Usp47Q8BY87 AC122371.3-201ENSMUST00000223402 1061 ntBASIC18.17■□□□□ 0.5
Usp47Q8BY87 AC154171.1-201ENSMUST00000224610 643 ntBASIC18.17■□□□□ 0.5
Usp47Q8BY87 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Usp47Q8BY87 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Usp47Q8BY87 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Usp47Q8BY87 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Usp47Q8BY87 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Usp47Q8BY87 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Usp47Q8BY87 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC18.17■□□□□ 0.5
Usp47Q8BY87 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC18.17■□□□□ 0.5
Usp47Q8BY87 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Usp47Q8BY87 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC18.17■□□□□ 0.5
Usp47Q8BY87 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC18.17■□□□□ 0.5
Usp47Q8BY87 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Usp47Q8BY87 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Usp47Q8BY87 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC18.17■□□□□ 0.5
Usp47Q8BY87 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Usp47Q8BY87 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Usp47Q8BY87 Gm24255-201ENSMUST00000104481 128 ntBASIC18.17■□□□□ 0.5
Usp47Q8BY87 Gm11222-201ENSMUST00000119005 738 ntBASIC18.17■□□□□ 0.5
Usp47Q8BY87 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC18.17■□□□□ 0.5
Usp47Q8BY87 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Usp47Q8BY87 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Usp47Q8BY87 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC18.17■□□□□ 0.5
Usp47Q8BY87 Gm44405-201ENSMUST00000198952 126 ntBASIC18.17■□□□□ 0.5
Usp47Q8BY87 Gm19963-201ENSMUST00000208413 1255 ntBASIC18.17■□□□□ 0.5
Usp47Q8BY87 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Usp47Q8BY87 AC154305.4-201ENSMUST00000224520 614 ntBASIC18.17■□□□□ 0.5
Usp47Q8BY87 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Usp47Q8BY87 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Usp47Q8BY87 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Usp47Q8BY87 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC18.16■□□□□ 0.5
Usp47Q8BY87 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Usp47Q8BY87 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Usp47Q8BY87 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Usp47Q8BY87 Gm42840-201ENSMUST00000200303 2251 ntBASIC18.16■□□□□ 0.5
Usp47Q8BY87 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC18.16■□□□□ 0.5
Usp47Q8BY87 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC18.16■□□□□ 0.5
Usp47Q8BY87 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Usp47Q8BY87 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Usp47Q8BY87 Gm6210-201ENSMUST00000204734 1942 ntBASIC18.16■□□□□ 0.5
Usp47Q8BY87 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Usp47Q8BY87 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Usp47Q8BY87 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Usp47Q8BY87 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Usp47Q8BY87 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Usp47Q8BY87 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Usp47Q8BY87 Gm13315-201ENSMUST00000120376 991 ntBASIC18.16■□□□□ 0.5
Usp47Q8BY87 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Usp47Q8BY87 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC18.16■□□□□ 0.5
Usp47Q8BY87 Gm39404-201ENSMUST00000216350 313 ntBASIC18.16■□□□□ 0.5
Usp47Q8BY87 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Usp47Q8BY87 Gm45925-201ENSMUST00000218882 744 ntBASIC18.16■□□□□ 0.5
Usp47Q8BY87 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Usp47Q8BY87 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Usp47Q8BY87 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Usp47Q8BY87 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Usp47Q8BY87 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Usp47Q8BY87 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Usp47Q8BY87 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Usp47Q8BY87 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Usp47Q8BY87 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Usp47Q8BY87 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC18.15■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 45.6 ms