Protein–RNA interactions for Protein: Q8BX13

Ube3d, E3 ubiquitin-protein ligase E3D, mousemouse

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3dQ8BX13 Gm45643-201ENSMUST00000211364 1484 ntBASIC11.54□□□□□ -0.56
Ube3dQ8BX13 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Ube3dQ8BX13 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ube3dQ8BX13 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ube3dQ8BX13 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC11.54□□□□□ -0.56
Ube3dQ8BX13 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Ube3dQ8BX13 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Ube3dQ8BX13 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC11.54□□□□□ -0.56
Ube3dQ8BX13 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ube3dQ8BX13 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
Ube3dQ8BX13 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ube3dQ8BX13 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC11.54□□□□□ -0.56
Ube3dQ8BX13 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ube3dQ8BX13 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Ube3dQ8BX13 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Ube3dQ8BX13 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ube3dQ8BX13 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ube3dQ8BX13 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ube3dQ8BX13 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ube3dQ8BX13 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ube3dQ8BX13 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ube3dQ8BX13 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ube3dQ8BX13 Zfp125-201ENSMUST00000079237 2488 ntBASIC11.53□□□□□ -0.56
Ube3dQ8BX13 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Ube3dQ8BX13 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ube3dQ8BX13 AC137842.1-201ENSMUST00000227896 2064 ntBASIC11.53□□□□□ -0.56
Ube3dQ8BX13 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ube3dQ8BX13 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ube3dQ8BX13 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ube3dQ8BX13 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ube3dQ8BX13 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Ube3dQ8BX13 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ube3dQ8BX13 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Ube3dQ8BX13 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC11.53□□□□□ -0.56
Ube3dQ8BX13 Mir1982-201ENSMUST00000157368 74 ntBASIC11.53□□□□□ -0.56
Ube3dQ8BX13 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC11.53□□□□□ -0.56
Ube3dQ8BX13 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC11.53□□□□□ -0.56
Ube3dQ8BX13 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC11.53□□□□□ -0.56
Ube3dQ8BX13 Gm38230-201ENSMUST00000193572 1159 ntBASIC11.53□□□□□ -0.56
Ube3dQ8BX13 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC11.53□□□□□ -0.56
Ube3dQ8BX13 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC11.53□□□□□ -0.56
Ube3dQ8BX13 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC11.53□□□□□ -0.56
Ube3dQ8BX13 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC11.53□□□□□ -0.56
Ube3dQ8BX13 Gm6091-201ENSMUST00000098307 165 ntBASIC11.53□□□□□ -0.56
Ube3dQ8BX13 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Ube3dQ8BX13 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Ube3dQ8BX13 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ube3dQ8BX13 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Ube3dQ8BX13 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC11.53□□□□□ -0.56
Ube3dQ8BX13 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ube3dQ8BX13 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ube3dQ8BX13 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Ube3dQ8BX13 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ube3dQ8BX13 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ube3dQ8BX13 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ube3dQ8BX13 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ube3dQ8BX13 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ube3dQ8BX13 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ube3dQ8BX13 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Ube3dQ8BX13 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ube3dQ8BX13 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ube3dQ8BX13 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Ube3dQ8BX13 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ube3dQ8BX13 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Ube3dQ8BX13 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ube3dQ8BX13 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ube3dQ8BX13 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ube3dQ8BX13 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Ube3dQ8BX13 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ube3dQ8BX13 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Ube3dQ8BX13 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Ube3dQ8BX13 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Ube3dQ8BX13 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Ube3dQ8BX13 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Ube3dQ8BX13 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC11.52□□□□□ -0.56
Ube3dQ8BX13 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Ube3dQ8BX13 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Ube3dQ8BX13 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Ube3dQ8BX13 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Ube3dQ8BX13 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC11.52□□□□□ -0.56
Ube3dQ8BX13 Zscan30-202ENSMUST00000224144 1458 ntBASIC11.52□□□□□ -0.56
Ube3dQ8BX13 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Ube3dQ8BX13 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.56
Ube3dQ8BX13 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Ube3dQ8BX13 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Ube3dQ8BX13 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Ube3dQ8BX13 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Ube3dQ8BX13 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC11.52□□□□□ -0.57
Ube3dQ8BX13 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Ube3dQ8BX13 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Ube3dQ8BX13 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Ube3dQ8BX13 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Ube3dQ8BX13 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Ube3dQ8BX13 Mir874-201ENSMUST00000104769 76 ntBASIC11.52□□□□□ -0.57
Ube3dQ8BX13 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC11.52□□□□□ -0.57
Ube3dQ8BX13 Gm6152-201ENSMUST00000151704 340 ntBASIC11.52□□□□□ -0.57
Ube3dQ8BX13 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC11.52□□□□□ -0.57
Ube3dQ8BX13 Gm29608-201ENSMUST00000190444 463 ntBASIC11.52□□□□□ -0.57
Ube3dQ8BX13 Gm38144-201ENSMUST00000192790 465 ntBASIC11.52□□□□□ -0.57
Ube3dQ8BX13 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC11.52□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms