Protein–RNA interactions for Protein: Q8BUM9

Usp43, Ubiquitin carboxyl-terminal hydrolase 43, mousemouse

Predictions only

Length 1,132 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp43Q8BUM9 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Usp43Q8BUM9 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Usp43Q8BUM9 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Usp43Q8BUM9 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Usp43Q8BUM9 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Usp43Q8BUM9 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Usp43Q8BUM9 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC13.11□□□□□ -0.31
Usp43Q8BUM9 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Usp43Q8BUM9 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Usp43Q8BUM9 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Usp43Q8BUM9 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Usp43Q8BUM9 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC13.11□□□□□ -0.31
Usp43Q8BUM9 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Usp43Q8BUM9 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC13.11□□□□□ -0.31
Usp43Q8BUM9 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Usp43Q8BUM9 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Usp43Q8BUM9 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Usp43Q8BUM9 Gm29649-201ENSMUST00000185649 419 ntBASIC13.11□□□□□ -0.31
Usp43Q8BUM9 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC13.11□□□□□ -0.31
Usp43Q8BUM9 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC13.11□□□□□ -0.31
Usp43Q8BUM9 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Usp43Q8BUM9 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Usp43Q8BUM9 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Usp43Q8BUM9 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Usp43Q8BUM9 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Usp43Q8BUM9 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Usp43Q8BUM9 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Usp43Q8BUM9 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Usp43Q8BUM9 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC13.11□□□□□ -0.31
Usp43Q8BUM9 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Usp43Q8BUM9 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Usp43Q8BUM9 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Usp43Q8BUM9 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Usp43Q8BUM9 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Usp43Q8BUM9 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Usp43Q8BUM9 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Usp43Q8BUM9 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Usp43Q8BUM9 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Usp43Q8BUM9 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Usp43Q8BUM9 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Usp43Q8BUM9 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Usp43Q8BUM9 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Usp43Q8BUM9 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Usp43Q8BUM9 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Usp43Q8BUM9 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Usp43Q8BUM9 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Usp43Q8BUM9 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Usp43Q8BUM9 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Usp43Q8BUM9 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC13.1□□□□□ -0.31
Usp43Q8BUM9 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Usp43Q8BUM9 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Usp43Q8BUM9 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC13.1□□□□□ -0.31
Usp43Q8BUM9 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC13.1□□□□□ -0.31
Usp43Q8BUM9 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC13.1□□□□□ -0.31
Usp43Q8BUM9 Gm7063-201ENSMUST00000186840 981 ntBASIC13.1□□□□□ -0.31
Usp43Q8BUM9 Gm37042-201ENSMUST00000193816 581 ntBASIC13.1□□□□□ -0.31
Usp43Q8BUM9 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Usp43Q8BUM9 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Usp43Q8BUM9 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Usp43Q8BUM9 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Usp43Q8BUM9 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Usp43Q8BUM9 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Usp43Q8BUM9 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Usp43Q8BUM9 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC13.1□□□□□ -0.31
Usp43Q8BUM9 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Usp43Q8BUM9 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Usp43Q8BUM9 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Usp43Q8BUM9 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Usp43Q8BUM9 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Usp43Q8BUM9 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Usp43Q8BUM9 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Usp43Q8BUM9 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC13.1□□□□□ -0.31
Usp43Q8BUM9 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Usp43Q8BUM9 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Usp43Q8BUM9 Gm10305-201ENSMUST00000195331 2475 ntBASIC13.1□□□□□ -0.31
Usp43Q8BUM9 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Usp43Q8BUM9 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Usp43Q8BUM9 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Usp43Q8BUM9 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Usp43Q8BUM9 Gm8617-201ENSMUST00000118796 2222 ntBASIC13.09□□□□□ -0.31
Usp43Q8BUM9 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Usp43Q8BUM9 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
Usp43Q8BUM9 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Usp43Q8BUM9 Gm42840-201ENSMUST00000200303 2251 ntBASIC13.09□□□□□ -0.31
Usp43Q8BUM9 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Usp43Q8BUM9 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Usp43Q8BUM9 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Usp43Q8BUM9 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Usp43Q8BUM9 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Usp43Q8BUM9 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Usp43Q8BUM9 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC13.09□□□□□ -0.31
Usp43Q8BUM9 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Usp43Q8BUM9 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC13.09□□□□□ -0.31
Usp43Q8BUM9 Gm14704-201ENSMUST00000120300 874 ntBASIC13.09□□□□□ -0.31
Usp43Q8BUM9 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Usp43Q8BUM9 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC13.09□□□□□ -0.31
Usp43Q8BUM9 Gm26185-201ENSMUST00000157692 266 ntBASIC13.09□□□□□ -0.31
Usp43Q8BUM9 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC13.09□□□□□ -0.31
Usp43Q8BUM9 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC13.09□□□□□ -0.31
Usp43Q8BUM9 Gm17208-201ENSMUST00000168388 535 ntBASIC13.09□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 58.4 ms