Protein–RNA interactions for Protein: Q8BTW8

Cdk5rap1, CDK5 regulatory subunit-associated protein 1, mousemouse

Predictions only

Length 588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap1Q8BTW8 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Cdk5rap1Q8BTW8 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cdk5rap1Q8BTW8 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cdk5rap1Q8BTW8 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC12.32□□□□□ -0.44
Cdk5rap1Q8BTW8 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cdk5rap1Q8BTW8 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cdk5rap1Q8BTW8 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cdk5rap1Q8BTW8 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cdk5rap1Q8BTW8 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC12.31□□□□□ -0.44
Cdk5rap1Q8BTW8 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC12.31□□□□□ -0.44
Cdk5rap1Q8BTW8 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cdk5rap1Q8BTW8 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cdk5rap1Q8BTW8 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC12.31□□□□□ -0.44
Cdk5rap1Q8BTW8 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cdk5rap1Q8BTW8 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC12.31□□□□□ -0.44
Cdk5rap1Q8BTW8 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cdk5rap1Q8BTW8 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cdk5rap1Q8BTW8 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Cdk5rap1Q8BTW8 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cdk5rap1Q8BTW8 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC12.31□□□□□ -0.44
Cdk5rap1Q8BTW8 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cdk5rap1Q8BTW8 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Cdk5rap1Q8BTW8 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC12.31□□□□□ -0.44
Cdk5rap1Q8BTW8 Gm14723-201ENSMUST00000118686 215 ntBASIC12.31□□□□□ -0.44
Cdk5rap1Q8BTW8 Gm13786-201ENSMUST00000122371 333 ntBASIC12.31□□□□□ -0.44
Cdk5rap1Q8BTW8 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC12.31□□□□□ -0.44
Cdk5rap1Q8BTW8 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC12.31□□□□□ -0.44
Cdk5rap1Q8BTW8 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC12.31□□□□□ -0.44
Cdk5rap1Q8BTW8 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC12.31□□□□□ -0.44
Cdk5rap1Q8BTW8 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC12.31□□□□□ -0.44
Cdk5rap1Q8BTW8 Gm7172-201ENSMUST00000218047 1152 ntBASIC12.31□□□□□ -0.44
Cdk5rap1Q8BTW8 Gm45930-201ENSMUST00000221330 292 ntBASIC12.31□□□□□ -0.44
Cdk5rap1Q8BTW8 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Cdk5rap1Q8BTW8 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Cdk5rap1Q8BTW8 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Cdk5rap1Q8BTW8 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cdk5rap1Q8BTW8 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Cdk5rap1Q8BTW8 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cdk5rap1Q8BTW8 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Cdk5rap1Q8BTW8 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cdk5rap1Q8BTW8 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cdk5rap1Q8BTW8 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cdk5rap1Q8BTW8 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Cdk5rap1Q8BTW8 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cdk5rap1Q8BTW8 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cdk5rap1Q8BTW8 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cdk5rap1Q8BTW8 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Cdk5rap1Q8BTW8 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cdk5rap1Q8BTW8 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Cdk5rap1Q8BTW8 Gm37844-201ENSMUST00000192473 4097 ntBASIC12.31□□□□□ -0.44
Cdk5rap1Q8BTW8 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC12.31□□□□□ -0.44
Cdk5rap1Q8BTW8 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Cdk5rap1Q8BTW8 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cdk5rap1Q8BTW8 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cdk5rap1Q8BTW8 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC12.3□□□□□ -0.44
Cdk5rap1Q8BTW8 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cdk5rap1Q8BTW8 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cdk5rap1Q8BTW8 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cdk5rap1Q8BTW8 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cdk5rap1Q8BTW8 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cdk5rap1Q8BTW8 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cdk5rap1Q8BTW8 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Cdk5rap1Q8BTW8 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cdk5rap1Q8BTW8 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC12.3□□□□□ -0.44
Cdk5rap1Q8BTW8 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cdk5rap1Q8BTW8 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cdk5rap1Q8BTW8 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cdk5rap1Q8BTW8 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Cdk5rap1Q8BTW8 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cdk5rap1Q8BTW8 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cdk5rap1Q8BTW8 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC12.3□□□□□ -0.44
Cdk5rap1Q8BTW8 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cdk5rap1Q8BTW8 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cdk5rap1Q8BTW8 Gm12241-201ENSMUST00000118330 726 ntBASIC12.3□□□□□ -0.44
Cdk5rap1Q8BTW8 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Cdk5rap1Q8BTW8 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cdk5rap1Q8BTW8 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cdk5rap1Q8BTW8 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC12.3□□□□□ -0.44
Cdk5rap1Q8BTW8 Gm27516-201ENSMUST00000184237 98 ntBASIC12.3□□□□□ -0.44
Cdk5rap1Q8BTW8 Mir8109-201ENSMUST00000184375 117 ntBASIC12.3□□□□□ -0.44
Cdk5rap1Q8BTW8 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Cdk5rap1Q8BTW8 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC12.3□□□□□ -0.44
Cdk5rap1Q8BTW8 Gm43822-201ENSMUST00000200285 476 ntBASIC12.3□□□□□ -0.44
Cdk5rap1Q8BTW8 Gm43416-201ENSMUST00000201916 1015 ntBASIC12.3□□□□□ -0.44
Cdk5rap1Q8BTW8 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC12.3□□□□□ -0.44
Cdk5rap1Q8BTW8 Gm9368-201ENSMUST00000219348 831 ntBASIC12.3□□□□□ -0.44
Cdk5rap1Q8BTW8 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC12.3□□□□□ -0.44
Cdk5rap1Q8BTW8 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Cdk5rap1Q8BTW8 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Cdk5rap1Q8BTW8 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Cdk5rap1Q8BTW8 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Cdk5rap1Q8BTW8 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cdk5rap1Q8BTW8 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cdk5rap1Q8BTW8 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC12.3□□□□□ -0.44
Cdk5rap1Q8BTW8 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cdk5rap1Q8BTW8 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cdk5rap1Q8BTW8 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cdk5rap1Q8BTW8 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cdk5rap1Q8BTW8 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC12.3□□□□□ -0.44
Cdk5rap1Q8BTW8 AC154262.2-201ENSMUST00000224310 2293 ntBASIC12.3□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 63.7 ms