Protein–RNA interactions for Protein: Q8BTS4

Nup54, Nuclear pore complex protein Nup54, mousemouse

Known RBP Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup54Q8BTS4 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nup54Q8BTS4 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC13.25□□□□□ -0.29
Nup54Q8BTS4 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nup54Q8BTS4 Gm23363-201ENSMUST00000175024 79 ntBASIC13.25□□□□□ -0.29
Nup54Q8BTS4 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC13.25□□□□□ -0.29
Nup54Q8BTS4 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Nup54Q8BTS4 Gm18584-201ENSMUST00000203098 964 ntBASIC13.25□□□□□ -0.29
Nup54Q8BTS4 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nup54Q8BTS4 Mir339-201ENSMUST00000083659 96 ntBASIC13.25□□□□□ -0.29
Nup54Q8BTS4 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nup54Q8BTS4 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nup54Q8BTS4 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nup54Q8BTS4 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nup54Q8BTS4 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nup54Q8BTS4 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nup54Q8BTS4 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nup54Q8BTS4 AC151895.1-201ENSMUST00000219025 1742 ntBASIC13.25□□□□□ -0.29
Nup54Q8BTS4 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC13.24□□□□□ -0.29
Nup54Q8BTS4 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nup54Q8BTS4 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nup54Q8BTS4 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nup54Q8BTS4 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nup54Q8BTS4 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nup54Q8BTS4 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nup54Q8BTS4 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nup54Q8BTS4 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nup54Q8BTS4 Gm45706-201ENSMUST00000213063 2136 ntBASIC13.24□□□□□ -0.29
Nup54Q8BTS4 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Nup54Q8BTS4 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Nup54Q8BTS4 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Nup54Q8BTS4 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nup54Q8BTS4 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nup54Q8BTS4 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC13.24□□□□□ -0.29
Nup54Q8BTS4 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nup54Q8BTS4 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nup54Q8BTS4 Gm13813-201ENSMUST00000120998 787 ntBASIC13.24□□□□□ -0.29
Nup54Q8BTS4 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Nup54Q8BTS4 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC13.24□□□□□ -0.29
Nup54Q8BTS4 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC13.24□□□□□ -0.29
Nup54Q8BTS4 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Nup54Q8BTS4 Gm38002-201ENSMUST00000193255 180 ntBASIC13.24□□□□□ -0.29
Nup54Q8BTS4 Gm18054-201ENSMUST00000207539 555 ntBASIC13.24□□□□□ -0.29
Nup54Q8BTS4 Gm45880-201ENSMUST00000213041 853 ntBASIC13.24□□□□□ -0.29
Nup54Q8BTS4 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Nup54Q8BTS4 AC154462.2-201ENSMUST00000227519 370 ntBASIC13.24□□□□□ -0.29
Nup54Q8BTS4 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nup54Q8BTS4 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nup54Q8BTS4 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nup54Q8BTS4 Gm9899-201ENSMUST00000065519 555 ntBASIC13.24□□□□□ -0.29
Nup54Q8BTS4 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Nup54Q8BTS4 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nup54Q8BTS4 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nup54Q8BTS4 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nup54Q8BTS4 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Nup54Q8BTS4 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC13.24□□□□□ -0.29
Nup54Q8BTS4 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Nup54Q8BTS4 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nup54Q8BTS4 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC13.24□□□□□ -0.29
Nup54Q8BTS4 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC13.24□□□□□ -0.29
Nup54Q8BTS4 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Nup54Q8BTS4 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nup54Q8BTS4 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Nup54Q8BTS4 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nup54Q8BTS4 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nup54Q8BTS4 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Nup54Q8BTS4 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Nup54Q8BTS4 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC13.23□□□□□ -0.29
Nup54Q8BTS4 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nup54Q8BTS4 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nup54Q8BTS4 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nup54Q8BTS4 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nup54Q8BTS4 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nup54Q8BTS4 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Nup54Q8BTS4 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC13.23□□□□□ -0.29
Nup54Q8BTS4 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC13.23□□□□□ -0.29
Nup54Q8BTS4 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Nup54Q8BTS4 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC13.23□□□□□ -0.29
Nup54Q8BTS4 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Nup54Q8BTS4 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nup54Q8BTS4 Gm14921-201ENSMUST00000118643 908 ntBASIC13.23□□□□□ -0.29
Nup54Q8BTS4 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
Nup54Q8BTS4 Gm12329-201ENSMUST00000120829 1007 ntBASIC13.23□□□□□ -0.29
Nup54Q8BTS4 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC13.23□□□□□ -0.29
Nup54Q8BTS4 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nup54Q8BTS4 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Nup54Q8BTS4 Gm3890-201ENSMUST00000182416 207 ntBASIC13.23□□□□□ -0.29
Nup54Q8BTS4 Gm27572-201ENSMUST00000183702 255 ntBASIC13.23□□□□□ -0.29
Nup54Q8BTS4 Gm42693-201ENSMUST00000196779 631 ntBASIC13.23□□□□□ -0.29
Nup54Q8BTS4 Gm18916-201ENSMUST00000198264 1246 ntBASIC13.23□□□□□ -0.29
Nup54Q8BTS4 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC13.23□□□□□ -0.29
Nup54Q8BTS4 AC133598.1-201ENSMUST00000224327 660 ntBASIC13.23□□□□□ -0.29
Nup54Q8BTS4 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nup54Q8BTS4 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nup54Q8BTS4 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nup54Q8BTS4 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nup54Q8BTS4 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nup54Q8BTS4 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nup54Q8BTS4 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nup54Q8BTS4 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC13.23□□□□□ -0.29
Nup54Q8BTS4 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 54 ms