Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Col16a1Q8BLX7 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Col16a1Q8BLX7 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Col16a1Q8BLX7 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Col16a1Q8BLX7 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Col16a1Q8BLX7 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Col16a1Q8BLX7 Gm24231-201ENSMUST00000104315 133 ntBASIC16.66■□□□□ 0.26
Col16a1Q8BLX7 Ldha-ps2-201ENSMUST00000118722 1057 ntBASIC16.66■□□□□ 0.26
Col16a1Q8BLX7 Gm11815-201ENSMUST00000139423 708 ntTSL 5 BASIC16.66■□□□□ 0.26
Col16a1Q8BLX7 Gm11211-201ENSMUST00000143618 359 ntTSL 3 BASIC16.66■□□□□ 0.26
Col16a1Q8BLX7 Gm7666-201ENSMUST00000146631 819 ntBASIC16.66■□□□□ 0.26
Col16a1Q8BLX7 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Col16a1Q8BLX7 Gm5778-201ENSMUST00000171003 1072 ntBASIC16.66■□□□□ 0.26
Col16a1Q8BLX7 Rps28-203ENSMUST00000173019 437 ntAPPRIS P1 TSL 3 BASIC16.66■□□□□ 0.26
Col16a1Q8BLX7 Hrc-202ENSMUST00000211327 607 ntTSL 5 BASIC16.66■□□□□ 0.26
Col16a1Q8BLX7 AC162938.2-204ENSMUST00000216455 984 ntTSL 5 BASIC16.66■□□□□ 0.26
Col16a1Q8BLX7 Gm34045-201ENSMUST00000217700 988 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Col16a1Q8BLX7 C330004P14Rik-201ENSMUST00000218833 628 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Col16a1Q8BLX7 Prm3-201ENSMUST00000050864 410 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Col16a1Q8BLX7 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Col16a1Q8BLX7 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Col16a1Q8BLX7 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC16.66■□□□□ 0.26
Col16a1Q8BLX7 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Col16a1Q8BLX7 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Col16a1Q8BLX7 Gm14150-201ENSMUST00000122404 1354 ntBASIC16.66■□□□□ 0.26
Col16a1Q8BLX7 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC16.66■□□□□ 0.26
Col16a1Q8BLX7 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Col16a1Q8BLX7 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Col16a1Q8BLX7 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Col16a1Q8BLX7 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Col16a1Q8BLX7 Pax5-203ENSMUST00000107825 1445 ntTSL 5 BASIC16.65■□□□□ 0.26
Col16a1Q8BLX7 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Col16a1Q8BLX7 Gm5638-201ENSMUST00000118618 1258 ntBASIC16.65■□□□□ 0.26
Col16a1Q8BLX7 Gm13888-201ENSMUST00000119148 422 ntBASIC16.65■□□□□ 0.26
Col16a1Q8BLX7 Gm53-203ENSMUST00000143887 757 ntTSL 3 BASIC16.65■□□□□ 0.26
Col16a1Q8BLX7 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC16.65■□□□□ 0.26
Col16a1Q8BLX7 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Col16a1Q8BLX7 Gm37905-201ENSMUST00000195310 341 ntBASIC16.65■□□□□ 0.26
Col16a1Q8BLX7 Gm17827-201ENSMUST00000211825 742 ntBASIC16.65■□□□□ 0.26
Col16a1Q8BLX7 Gm29676-202ENSMUST00000222409 364 ntTSL 2 BASIC16.65■□□□□ 0.26
Col16a1Q8BLX7 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Col16a1Q8BLX7 Lce1e-201ENSMUST00000090867 711 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Col16a1Q8BLX7 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Col16a1Q8BLX7 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC16.65■□□□□ 0.26
Col16a1Q8BLX7 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Col16a1Q8BLX7 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Col16a1Q8BLX7 Gm44851-201ENSMUST00000205735 2309 ntBASIC16.65■□□□□ 0.26
Col16a1Q8BLX7 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Col16a1Q8BLX7 Cdc42ep2-201ENSMUST00000055458 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Col16a1Q8BLX7 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Col16a1Q8BLX7 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Col16a1Q8BLX7 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Col16a1Q8BLX7 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Col16a1Q8BLX7 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Col16a1Q8BLX7 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Col16a1Q8BLX7 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.26
Col16a1Q8BLX7 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.26
Col16a1Q8BLX7 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Col16a1Q8BLX7 Gm12798-201ENSMUST00000124786 666 ntTSL 5 BASIC16.64■□□□□ 0.25
Col16a1Q8BLX7 Gm27175-201ENSMUST00000183759 606 ntTSL 3 BASIC16.64■□□□□ 0.25
Col16a1Q8BLX7 Gm27223-201ENSMUST00000184653 606 ntTSL 3 BASIC16.64■□□□□ 0.25
Col16a1Q8BLX7 Gm18304-201ENSMUST00000189162 546 ntBASIC16.64■□□□□ 0.25
Col16a1Q8BLX7 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Col16a1Q8BLX7 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC16.64■□□□□ 0.25
Col16a1Q8BLX7 4930523C07Rik-202ENSMUST00000097513 300 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Col16a1Q8BLX7 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Col16a1Q8BLX7 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Col16a1Q8BLX7 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Col16a1Q8BLX7 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Col16a1Q8BLX7 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Col16a1Q8BLX7 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
Col16a1Q8BLX7 Gm13142-201ENSMUST00000117213 1453 ntBASIC16.64■□□□□ 0.25
Col16a1Q8BLX7 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Col16a1Q8BLX7 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC16.64■□□□□ 0.25
Col16a1Q8BLX7 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Col16a1Q8BLX7 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Col16a1Q8BLX7 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Col16a1Q8BLX7 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Col16a1Q8BLX7 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Col16a1Q8BLX7 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC16.64■□□□□ 0.25
Col16a1Q8BLX7 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Col16a1Q8BLX7 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Col16a1Q8BLX7 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Col16a1Q8BLX7 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Col16a1Q8BLX7 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC16.64■□□□□ 0.25
Col16a1Q8BLX7 Gm42682-201ENSMUST00000198349 1265 ntBASIC16.64■□□□□ 0.25
Col16a1Q8BLX7 Gm19287-201ENSMUST00000203190 358 ntBASIC16.64■□□□□ 0.25
Col16a1Q8BLX7 Gm45550-201ENSMUST00000209380 946 ntBASIC16.64■□□□□ 0.25
Col16a1Q8BLX7 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC16.64■□□□□ 0.25
Col16a1Q8BLX7 Emp3-201ENSMUST00000038876 736 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Col16a1Q8BLX7 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Col16a1Q8BLX7 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Col16a1Q8BLX7 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Col16a1Q8BLX7 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Col16a1Q8BLX7 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Col16a1Q8BLX7 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Col16a1Q8BLX7 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Col16a1Q8BLX7 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Col16a1Q8BLX7 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Col16a1Q8BLX7 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 47.6 ms