Protein–RNA interactions for Protein: Q8BLA8

Trpa1, Transient receptor potential cation channel subfamily A member 1, mousemouse

Predictions only

Length 1,125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trpa1Q8BLA8 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trpa1Q8BLA8 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC13.66□□□□□ -0.22
Trpa1Q8BLA8 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Trpa1Q8BLA8 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trpa1Q8BLA8 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trpa1Q8BLA8 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trpa1Q8BLA8 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC13.66□□□□□ -0.22
Trpa1Q8BLA8 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trpa1Q8BLA8 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trpa1Q8BLA8 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trpa1Q8BLA8 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trpa1Q8BLA8 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trpa1Q8BLA8 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC13.66□□□□□ -0.22
Trpa1Q8BLA8 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Trpa1Q8BLA8 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trpa1Q8BLA8 Mup-ps23-201ENSMUST00000118063 630 ntBASIC13.66□□□□□ -0.22
Trpa1Q8BLA8 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trpa1Q8BLA8 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trpa1Q8BLA8 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trpa1Q8BLA8 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trpa1Q8BLA8 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC13.66□□□□□ -0.22
Trpa1Q8BLA8 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Trpa1Q8BLA8 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trpa1Q8BLA8 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trpa1Q8BLA8 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trpa1Q8BLA8 Gm43463-201ENSMUST00000195967 1803 ntBASIC13.66□□□□□ -0.22
Trpa1Q8BLA8 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trpa1Q8BLA8 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trpa1Q8BLA8 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC13.66□□□□□ -0.22
Trpa1Q8BLA8 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trpa1Q8BLA8 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC13.66□□□□□ -0.22
Trpa1Q8BLA8 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trpa1Q8BLA8 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trpa1Q8BLA8 Olfr742-202ENSMUST00000213935 2117 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Trpa1Q8BLA8 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Trpa1Q8BLA8 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC13.66□□□□□ -0.22
Trpa1Q8BLA8 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC13.65□□□□□ -0.22
Trpa1Q8BLA8 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trpa1Q8BLA8 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC13.65□□□□□ -0.22
Trpa1Q8BLA8 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trpa1Q8BLA8 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trpa1Q8BLA8 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trpa1Q8BLA8 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trpa1Q8BLA8 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trpa1Q8BLA8 AC096628.2-201ENSMUST00000225443 1413 ntBASIC13.65□□□□□ -0.22
Trpa1Q8BLA8 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
Trpa1Q8BLA8 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Trpa1Q8BLA8 Gm15544-201ENSMUST00000118776 1531 ntBASIC13.65□□□□□ -0.22
Trpa1Q8BLA8 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trpa1Q8BLA8 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trpa1Q8BLA8 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trpa1Q8BLA8 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trpa1Q8BLA8 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trpa1Q8BLA8 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trpa1Q8BLA8 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC13.65□□□□□ -0.22
Trpa1Q8BLA8 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trpa1Q8BLA8 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Trpa1Q8BLA8 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trpa1Q8BLA8 Gm12203-201ENSMUST00000118235 598 ntBASIC13.65□□□□□ -0.22
Trpa1Q8BLA8 Gm12209-201ENSMUST00000120089 596 ntBASIC13.65□□□□□ -0.22
Trpa1Q8BLA8 Gm10156-201ENSMUST00000122364 462 ntBASIC13.65□□□□□ -0.22
Trpa1Q8BLA8 Gm22331-201ENSMUST00000158066 136 ntBASIC13.65□□□□□ -0.22
Trpa1Q8BLA8 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC13.65□□□□□ -0.22
Trpa1Q8BLA8 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC13.65□□□□□ -0.22
Trpa1Q8BLA8 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trpa1Q8BLA8 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trpa1Q8BLA8 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC13.65□□□□□ -0.22
Trpa1Q8BLA8 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC13.65□□□□□ -0.22
Trpa1Q8BLA8 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC13.65□□□□□ -0.22
Trpa1Q8BLA8 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC13.65□□□□□ -0.22
Trpa1Q8BLA8 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC13.65□□□□□ -0.22
Trpa1Q8BLA8 AC134335.2-201ENSMUST00000227660 440 ntBASIC13.65□□□□□ -0.22
Trpa1Q8BLA8 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trpa1Q8BLA8 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trpa1Q8BLA8 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trpa1Q8BLA8 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Trpa1Q8BLA8 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trpa1Q8BLA8 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trpa1Q8BLA8 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Trpa1Q8BLA8 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trpa1Q8BLA8 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trpa1Q8BLA8 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trpa1Q8BLA8 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trpa1Q8BLA8 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Trpa1Q8BLA8 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trpa1Q8BLA8 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trpa1Q8BLA8 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trpa1Q8BLA8 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC13.65□□□□□ -0.22
Trpa1Q8BLA8 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC13.64□□□□□ -0.23
Trpa1Q8BLA8 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trpa1Q8BLA8 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trpa1Q8BLA8 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trpa1Q8BLA8 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Trpa1Q8BLA8 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC13.64□□□□□ -0.23
Trpa1Q8BLA8 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC13.64□□□□□ -0.23
Trpa1Q8BLA8 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC13.64□□□□□ -0.23
Trpa1Q8BLA8 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trpa1Q8BLA8 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trpa1Q8BLA8 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trpa1Q8BLA8 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC13.64□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 57.6 ms