Protein–RNA interactions for Protein: Q8BI21

Rnf38, E3 ubiquitin-protein ligase RNF38, mousemouse

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf38Q8BI21 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rnf38Q8BI21 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Rnf38Q8BI21 AC154527.2-201ENSMUST00000225256 1466 ntBASIC12.53□□□□□ -0.4
Rnf38Q8BI21 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rnf38Q8BI21 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rnf38Q8BI21 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC12.53□□□□□ -0.4
Rnf38Q8BI21 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rnf38Q8BI21 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Rnf38Q8BI21 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rnf38Q8BI21 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rnf38Q8BI21 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rnf38Q8BI21 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Rnf38Q8BI21 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Rnf38Q8BI21 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rnf38Q8BI21 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Rnf38Q8BI21 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC12.53□□□□□ -0.4
Rnf38Q8BI21 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC12.53□□□□□ -0.4
Rnf38Q8BI21 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Rnf38Q8BI21 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC12.53□□□□□ -0.4
Rnf38Q8BI21 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Rnf38Q8BI21 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Rnf38Q8BI21 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rnf38Q8BI21 Gm6218-201ENSMUST00000219812 628 ntBASIC12.53□□□□□ -0.4
Rnf38Q8BI21 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rnf38Q8BI21 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rnf38Q8BI21 Pck2-205ENSMUST00000226352 2784 ntBASIC12.53□□□□□ -0.4
Rnf38Q8BI21 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rnf38Q8BI21 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rnf38Q8BI21 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rnf38Q8BI21 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC12.53□□□□□ -0.4
Rnf38Q8BI21 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Rnf38Q8BI21 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rnf38Q8BI21 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Rnf38Q8BI21 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rnf38Q8BI21 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC12.53□□□□□ -0.4
Rnf38Q8BI21 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Rnf38Q8BI21 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC12.53□□□□□ -0.4
Rnf38Q8BI21 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rnf38Q8BI21 LMLN2-201ENSMUST00000224691 2342 ntAPPRIS P5 BASIC12.53□□□□□ -0.4
Rnf38Q8BI21 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rnf38Q8BI21 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC12.52□□□□□ -0.4
Rnf38Q8BI21 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Rnf38Q8BI21 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Rnf38Q8BI21 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Rnf38Q8BI21 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Rnf38Q8BI21 Clpb-211ENSMUST00000209579 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Rnf38Q8BI21 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
Rnf38Q8BI21 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Rnf38Q8BI21 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC12.52□□□□□ -0.4
Rnf38Q8BI21 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC12.52□□□□□ -0.4
Rnf38Q8BI21 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rnf38Q8BI21 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Rnf38Q8BI21 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC12.52□□□□□ -0.41
Rnf38Q8BI21 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Rnf38Q8BI21 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rnf38Q8BI21 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC12.52□□□□□ -0.41
Rnf38Q8BI21 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Rnf38Q8BI21 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC12.52□□□□□ -0.41
Rnf38Q8BI21 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Rnf38Q8BI21 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC12.52□□□□□ -0.41
Rnf38Q8BI21 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rnf38Q8BI21 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rnf38Q8BI21 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rnf38Q8BI21 Gm2423-201ENSMUST00000074863 733 ntBASIC12.52□□□□□ -0.41
Rnf38Q8BI21 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rnf38Q8BI21 Adra1a-206ENSMUST00000225182 2337 ntBASIC12.52□□□□□ -0.41
Rnf38Q8BI21 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Rnf38Q8BI21 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Rnf38Q8BI21 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rnf38Q8BI21 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Rnf38Q8BI21 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rnf38Q8BI21 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC12.52□□□□□ -0.41
Rnf38Q8BI21 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Rnf38Q8BI21 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rnf38Q8BI21 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC12.52□□□□□ -0.41
Rnf38Q8BI21 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Rnf38Q8BI21 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Rnf38Q8BI21 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Rnf38Q8BI21 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Rnf38Q8BI21 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Rnf38Q8BI21 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rnf38Q8BI21 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Rnf38Q8BI21 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC12.51□□□□□ -0.41
Rnf38Q8BI21 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Rnf38Q8BI21 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Rnf38Q8BI21 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rnf38Q8BI21 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Rnf38Q8BI21 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Rnf38Q8BI21 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rnf38Q8BI21 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rnf38Q8BI21 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC12.51□□□□□ -0.41
Rnf38Q8BI21 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC12.51□□□□□ -0.41
Rnf38Q8BI21 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Rnf38Q8BI21 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Rnf38Q8BI21 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC12.51□□□□□ -0.41
Rnf38Q8BI21 Gm5866-201ENSMUST00000177881 973 ntBASIC12.51□□□□□ -0.41
Rnf38Q8BI21 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Rnf38Q8BI21 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC12.51□□□□□ -0.41
Rnf38Q8BI21 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC12.51□□□□□ -0.41
Rnf38Q8BI21 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC12.51□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms