Protein–RNA interactions for Protein: Q8BGE6

Atg4b, Cysteine protease ATG4B, mousemouse

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4bQ8BGE6 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC12.21□□□□□ -0.45
Atg4bQ8BGE6 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC12.21□□□□□ -0.45
Atg4bQ8BGE6 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC12.21□□□□□ -0.45
Atg4bQ8BGE6 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Atg4bQ8BGE6 AC130829.1-201ENSMUST00000221548 494 ntBASIC12.21□□□□□ -0.45
Atg4bQ8BGE6 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Atg4bQ8BGE6 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Atg4bQ8BGE6 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Atg4bQ8BGE6 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Atg4bQ8BGE6 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC12.21□□□□□ -0.45
Atg4bQ8BGE6 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC12.21□□□□□ -0.46
Atg4bQ8BGE6 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Atg4bQ8BGE6 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Atg4bQ8BGE6 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
Atg4bQ8BGE6 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
Atg4bQ8BGE6 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Atg4bQ8BGE6 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Atg4bQ8BGE6 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC12.2□□□□□ -0.46
Atg4bQ8BGE6 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Atg4bQ8BGE6 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Atg4bQ8BGE6 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Atg4bQ8BGE6 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Atg4bQ8BGE6 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Atg4bQ8BGE6 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Atg4bQ8BGE6 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Atg4bQ8BGE6 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC12.2□□□□□ -0.46
Atg4bQ8BGE6 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC12.2□□□□□ -0.46
Atg4bQ8BGE6 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Atg4bQ8BGE6 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Atg4bQ8BGE6 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Atg4bQ8BGE6 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Atg4bQ8BGE6 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC12.2□□□□□ -0.46
Atg4bQ8BGE6 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Atg4bQ8BGE6 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Atg4bQ8BGE6 Gm4271-201ENSMUST00000174444 973 ntBASIC12.2□□□□□ -0.46
Atg4bQ8BGE6 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC12.2□□□□□ -0.46
Atg4bQ8BGE6 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC12.2□□□□□ -0.46
Atg4bQ8BGE6 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Atg4bQ8BGE6 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC12.2□□□□□ -0.46
Atg4bQ8BGE6 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Atg4bQ8BGE6 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Atg4bQ8BGE6 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Atg4bQ8BGE6 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Atg4bQ8BGE6 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Atg4bQ8BGE6 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Atg4bQ8BGE6 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Atg4bQ8BGE6 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Atg4bQ8BGE6 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Atg4bQ8BGE6 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Atg4bQ8BGE6 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Atg4bQ8BGE6 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Atg4bQ8BGE6 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Atg4bQ8BGE6 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC12.2□□□□□ -0.46
Atg4bQ8BGE6 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Atg4bQ8BGE6 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Atg4bQ8BGE6 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Atg4bQ8BGE6 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
Atg4bQ8BGE6 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Atg4bQ8BGE6 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC12.2□□□□□ -0.46
Atg4bQ8BGE6 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Atg4bQ8BGE6 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Atg4bQ8BGE6 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Atg4bQ8BGE6 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Atg4bQ8BGE6 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Atg4bQ8BGE6 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Atg4bQ8BGE6 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Atg4bQ8BGE6 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Atg4bQ8BGE6 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Atg4bQ8BGE6 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Atg4bQ8BGE6 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Atg4bQ8BGE6 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Atg4bQ8BGE6 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Atg4bQ8BGE6 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC12.19□□□□□ -0.46
Atg4bQ8BGE6 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Atg4bQ8BGE6 Gm12390-201ENSMUST00000117897 397 ntBASIC12.19□□□□□ -0.46
Atg4bQ8BGE6 Gm2231-201ENSMUST00000125661 612 ntBASIC12.19□□□□□ -0.46
Atg4bQ8BGE6 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Atg4bQ8BGE6 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Atg4bQ8BGE6 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Atg4bQ8BGE6 AC132467.2-202ENSMUST00000227726 559 ntBASIC12.19□□□□□ -0.46
Atg4bQ8BGE6 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Atg4bQ8BGE6 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Atg4bQ8BGE6 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Atg4bQ8BGE6 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC12.19□□□□□ -0.46
Atg4bQ8BGE6 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Atg4bQ8BGE6 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Atg4bQ8BGE6 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Atg4bQ8BGE6 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Atg4bQ8BGE6 CT009713.10-201ENSMUST00000225013 1986 ntBASIC12.19□□□□□ -0.46
Atg4bQ8BGE6 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC12.19□□□□□ -0.46
Atg4bQ8BGE6 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC12.19□□□□□ -0.46
Atg4bQ8BGE6 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Atg4bQ8BGE6 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Atg4bQ8BGE6 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Atg4bQ8BGE6 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Atg4bQ8BGE6 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC12.18□□□□□ -0.46
Atg4bQ8BGE6 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Atg4bQ8BGE6 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Atg4bQ8BGE6 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Atg4bQ8BGE6 Gm44094-201ENSMUST00000204703 2030 ntBASIC12.18□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 43.8 ms