Protein–RNA interactions for Protein: Q811S7

Ubp1, Upstream-binding protein 1, mousemouse

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1Q811S7 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Ubp1Q811S7 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ubp1Q811S7 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ubp1Q811S7 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ubp1Q811S7 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ubp1Q811S7 Meig1-202ENSMUST00000115081 421 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Ubp1Q811S7 D3Ertd751e-204ENSMUST00000119572 1011 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ubp1Q811S7 Gm13829-201ENSMUST00000119600 138 ntBASIC12.81□□□□□ -0.36
Ubp1Q811S7 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC12.81□□□□□ -0.36
Ubp1Q811S7 Gm43433-201ENSMUST00000196573 481 ntBASIC12.81□□□□□ -0.36
Ubp1Q811S7 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Ubp1Q811S7 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC12.81□□□□□ -0.36
Ubp1Q811S7 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC12.81□□□□□ -0.36
Ubp1Q811S7 Gm40383-201ENSMUST00000222601 610 ntTSL 5 BASIC12.81□□□□□ -0.36
Ubp1Q811S7 Cdk7-205ENSMUST00000225990 1159 ntBASIC12.81□□□□□ -0.36
Ubp1Q811S7 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ubp1Q811S7 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
Ubp1Q811S7 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ubp1Q811S7 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ubp1Q811S7 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ubp1Q811S7 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Ubp1Q811S7 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ubp1Q811S7 AC114008.2-201ENSMUST00000227699 1347 ntBASIC12.81□□□□□ -0.36
Ubp1Q811S7 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC12.81□□□□□ -0.36
Ubp1Q811S7 Gm14608-201ENSMUST00000120030 1553 ntBASIC12.81□□□□□ -0.36
Ubp1Q811S7 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ubp1Q811S7 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Ubp1Q811S7 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ubp1Q811S7 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Ubp1Q811S7 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ubp1Q811S7 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ubp1Q811S7 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ubp1Q811S7 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ubp1Q811S7 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ubp1Q811S7 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ubp1Q811S7 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC12.8□□□□□ -0.36
Ubp1Q811S7 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ubp1Q811S7 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ubp1Q811S7 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ubp1Q811S7 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ubp1Q811S7 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ubp1Q811S7 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ubp1Q811S7 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ubp1Q811S7 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ubp1Q811S7 Gm11978-201ENSMUST00000122315 466 ntBASIC12.8□□□□□ -0.36
Ubp1Q811S7 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ubp1Q811S7 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Ubp1Q811S7 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC12.8□□□□□ -0.36
Ubp1Q811S7 Gm8835-201ENSMUST00000173096 1169 ntBASIC12.8□□□□□ -0.36
Ubp1Q811S7 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Ubp1Q811S7 Gm38230-201ENSMUST00000193572 1159 ntBASIC12.8□□□□□ -0.36
Ubp1Q811S7 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC12.8□□□□□ -0.36
Ubp1Q811S7 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC12.8□□□□□ -0.36
Ubp1Q811S7 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC12.8□□□□□ -0.36
Ubp1Q811S7 AC154276.1-201ENSMUST00000228874 1299 ntBASIC12.8□□□□□ -0.36
Ubp1Q811S7 Gm10146-201ENSMUST00000072739 309 ntBASIC12.8□□□□□ -0.36
Ubp1Q811S7 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ubp1Q811S7 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ubp1Q811S7 Sgk1-213ENSMUST00000164659 2602 ntTSL 5 BASIC12.8□□□□□ -0.36
Ubp1Q811S7 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ubp1Q811S7 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ubp1Q811S7 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ubp1Q811S7 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC12.8□□□□□ -0.36
Ubp1Q811S7 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Ubp1Q811S7 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ubp1Q811S7 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC12.8□□□□□ -0.36
Ubp1Q811S7 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ubp1Q811S7 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ubp1Q811S7 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ubp1Q811S7 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ubp1Q811S7 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ubp1Q811S7 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ubp1Q811S7 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ubp1Q811S7 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ubp1Q811S7 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ubp1Q811S7 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Ubp1Q811S7 Gm15222-202ENSMUST00000228667 1726 ntBASIC12.79□□□□□ -0.36
Ubp1Q811S7 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ubp1Q811S7 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Ubp1Q811S7 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ubp1Q811S7 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ubp1Q811S7 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ubp1Q811S7 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ubp1Q811S7 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ubp1Q811S7 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ubp1Q811S7 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ubp1Q811S7 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ubp1Q811S7 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC12.79□□□□□ -0.36
Ubp1Q811S7 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ubp1Q811S7 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Ubp1Q811S7 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ubp1Q811S7 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Ubp1Q811S7 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC12.79□□□□□ -0.36
Ubp1Q811S7 Gm12539-201ENSMUST00000121549 1098 ntBASIC12.79□□□□□ -0.36
Ubp1Q811S7 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC12.79□□□□□ -0.36
Ubp1Q811S7 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC12.79□□□□□ -0.36
Ubp1Q811S7 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ubp1Q811S7 Pid1-205ENSMUST00000176720 450 ntTSL 5 BASIC12.79□□□□□ -0.36
Ubp1Q811S7 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ubp1Q811S7 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC12.79□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 58.4 ms