Protein–RNA interactions for Protein: Q80U87

Usp8, Ubiquitin carboxyl-terminal hydrolase 8, mousemouse

Predictions only

Length 1,080 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp8Q80U87 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Usp8Q80U87 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Usp8Q80U87 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Usp8Q80U87 Gm10176-201ENSMUST00000159707 2264 ntBASIC13.02□□□□□ -0.33
Usp8Q80U87 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Usp8Q80U87 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
Usp8Q80U87 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Usp8Q80U87 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC13.02□□□□□ -0.33
Usp8Q80U87 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Usp8Q80U87 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Usp8Q80U87 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC13.02□□□□□ -0.33
Usp8Q80U87 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Usp8Q80U87 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Usp8Q80U87 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Usp8Q80U87 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Usp8Q80U87 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Usp8Q80U87 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC13.01□□□□□ -0.33
Usp8Q80U87 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Usp8Q80U87 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Usp8Q80U87 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Usp8Q80U87 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Usp8Q80U87 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Usp8Q80U87 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Usp8Q80U87 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Usp8Q80U87 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Usp8Q80U87 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Usp8Q80U87 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Usp8Q80U87 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Usp8Q80U87 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Usp8Q80U87 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Usp8Q80U87 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Usp8Q80U87 Ldha-ps-201ENSMUST00000119390 995 ntBASIC13.01□□□□□ -0.33
Usp8Q80U87 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Usp8Q80U87 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC13.01□□□□□ -0.33
Usp8Q80U87 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Usp8Q80U87 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC13.01□□□□□ -0.33
Usp8Q80U87 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC13.01□□□□□ -0.33
Usp8Q80U87 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC13.01□□□□□ -0.33
Usp8Q80U87 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Usp8Q80U87 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Usp8Q80U87 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Usp8Q80U87 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Usp8Q80U87 AC154527.2-201ENSMUST00000225256 1466 ntBASIC13.01□□□□□ -0.33
Usp8Q80U87 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Usp8Q80U87 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Usp8Q80U87 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Usp8Q80U87 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC13.01□□□□□ -0.33
Usp8Q80U87 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC13.01□□□□□ -0.33
Usp8Q80U87 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC13.01□□□□□ -0.33
Usp8Q80U87 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Usp8Q80U87 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Usp8Q80U87 AC122314.1-201ENSMUST00000223056 2239 ntBASIC13.01□□□□□ -0.33
Usp8Q80U87 Zfp125-201ENSMUST00000079237 2488 ntBASIC13.01□□□□□ -0.33
Usp8Q80U87 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC13.01□□□□□ -0.33
Usp8Q80U87 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
Usp8Q80U87 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Usp8Q80U87 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Usp8Q80U87 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC13.01□□□□□ -0.33
Usp8Q80U87 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Usp8Q80U87 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Usp8Q80U87 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
Usp8Q80U87 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC13□□□□□ -0.33
Usp8Q80U87 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Usp8Q80U87 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC13□□□□□ -0.33
Usp8Q80U87 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Usp8Q80U87 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Usp8Q80U87 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC13□□□□□ -0.33
Usp8Q80U87 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Usp8Q80U87 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Usp8Q80U87 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Usp8Q80U87 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Usp8Q80U87 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Usp8Q80U87 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Usp8Q80U87 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Usp8Q80U87 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC13□□□□□ -0.33
Usp8Q80U87 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC13□□□□□ -0.33
Usp8Q80U87 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Usp8Q80U87 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC13□□□□□ -0.33
Usp8Q80U87 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC13□□□□□ -0.33
Usp8Q80U87 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Usp8Q80U87 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC13□□□□□ -0.33
Usp8Q80U87 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC13□□□□□ -0.33
Usp8Q80U87 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Usp8Q80U87 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Usp8Q80U87 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC13□□□□□ -0.33
Usp8Q80U87 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Usp8Q80U87 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Usp8Q80U87 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC13□□□□□ -0.33
Usp8Q80U87 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC13□□□□□ -0.33
Usp8Q80U87 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC13□□□□□ -0.33
Usp8Q80U87 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC13□□□□□ -0.33
Usp8Q80U87 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Usp8Q80U87 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC13□□□□□ -0.33
Usp8Q80U87 Gm42550-201ENSMUST00000201553 960 ntBASIC13□□□□□ -0.33
Usp8Q80U87 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Usp8Q80U87 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Usp8Q80U87 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
Usp8Q80U87 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Usp8Q80U87 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Usp8Q80U87 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC13□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 47 ms