Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Gm37844-201ENSMUST00000192473 4097 ntBASIC12.72□□□□□ -0.37
Pcdh19Q80TF3 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdh19Q80TF3 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pcdh19Q80TF3 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pcdh19Q80TF3 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Pcdh19Q80TF3 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pcdh19Q80TF3 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC12.71□□□□□ -0.37
Pcdh19Q80TF3 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pcdh19Q80TF3 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Pcdh19Q80TF3 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pcdh19Q80TF3 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pcdh19Q80TF3 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pcdh19Q80TF3 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pcdh19Q80TF3 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC12.71□□□□□ -0.37
Pcdh19Q80TF3 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC12.71□□□□□ -0.37
Pcdh19Q80TF3 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC12.71□□□□□ -0.37
Pcdh19Q80TF3 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pcdh19Q80TF3 Gm14723-201ENSMUST00000118686 215 ntBASIC12.71□□□□□ -0.37
Pcdh19Q80TF3 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Pcdh19Q80TF3 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC12.71□□□□□ -0.37
Pcdh19Q80TF3 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC12.71□□□□□ -0.37
Pcdh19Q80TF3 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC12.71□□□□□ -0.37
Pcdh19Q80TF3 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC12.71□□□□□ -0.37
Pcdh19Q80TF3 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC12.71□□□□□ -0.37
Pcdh19Q80TF3 Gm3890-201ENSMUST00000182416 207 ntBASIC12.71□□□□□ -0.37
Pcdh19Q80TF3 Gm9061-201ENSMUST00000182707 1006 ntBASIC12.71□□□□□ -0.37
Pcdh19Q80TF3 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
Pcdh19Q80TF3 Gm37489-201ENSMUST00000191883 159 ntBASIC12.71□□□□□ -0.37
Pcdh19Q80TF3 Gm5850-201ENSMUST00000192923 1206 ntBASIC12.71□□□□□ -0.37
Pcdh19Q80TF3 Gm8099-201ENSMUST00000200510 742 ntBASIC12.71□□□□□ -0.37
Pcdh19Q80TF3 Gm7172-201ENSMUST00000218047 1152 ntBASIC12.71□□□□□ -0.37
Pcdh19Q80TF3 AC069562.3-201ENSMUST00000225387 587 ntBASIC12.71□□□□□ -0.37
Pcdh19Q80TF3 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pcdh19Q80TF3 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pcdh19Q80TF3 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pcdh19Q80TF3 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pcdh19Q80TF3 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pcdh19Q80TF3 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pcdh19Q80TF3 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
Pcdh19Q80TF3 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pcdh19Q80TF3 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Pcdh19Q80TF3 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Pcdh19Q80TF3 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Pcdh19Q80TF3 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
Pcdh19Q80TF3 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Pcdh19Q80TF3 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
Pcdh19Q80TF3 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC12.71□□□□□ -0.38
Pcdh19Q80TF3 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pcdh19Q80TF3 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pcdh19Q80TF3 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC12.7□□□□□ -0.38
Pcdh19Q80TF3 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC12.7□□□□□ -0.38
Pcdh19Q80TF3 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pcdh19Q80TF3 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pcdh19Q80TF3 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pcdh19Q80TF3 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Pcdh19Q80TF3 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Pcdh19Q80TF3 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC12.7□□□□□ -0.38
Pcdh19Q80TF3 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC12.7□□□□□ -0.38
Pcdh19Q80TF3 Gm20614-201ENSMUST00000177106 632 ntBASIC12.7□□□□□ -0.38
Pcdh19Q80TF3 Gm27516-201ENSMUST00000184237 98 ntBASIC12.7□□□□□ -0.38
Pcdh19Q80TF3 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC12.7□□□□□ -0.38
Pcdh19Q80TF3 Gm43416-201ENSMUST00000201916 1015 ntBASIC12.7□□□□□ -0.38
Pcdh19Q80TF3 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Pcdh19Q80TF3 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC12.7□□□□□ -0.38
Pcdh19Q80TF3 Gm10608-202ENSMUST00000213924 676 ntBASIC12.7□□□□□ -0.38
Pcdh19Q80TF3 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC12.7□□□□□ -0.38
Pcdh19Q80TF3 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Pcdh19Q80TF3 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pcdh19Q80TF3 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pcdh19Q80TF3 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pcdh19Q80TF3 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pcdh19Q80TF3 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pcdh19Q80TF3 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Pcdh19Q80TF3 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pcdh19Q80TF3 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pcdh19Q80TF3 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pcdh19Q80TF3 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pcdh19Q80TF3 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pcdh19Q80TF3 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Pcdh19Q80TF3 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pcdh19Q80TF3 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdh19Q80TF3 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdh19Q80TF3 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC12.69□□□□□ -0.38
Pcdh19Q80TF3 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdh19Q80TF3 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdh19Q80TF3 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdh19Q80TF3 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdh19Q80TF3 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdh19Q80TF3 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdh19Q80TF3 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdh19Q80TF3 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Pcdh19Q80TF3 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Pcdh19Q80TF3 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdh19Q80TF3 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdh19Q80TF3 Gm10434-201ENSMUST00000101158 471 ntBASIC12.69□□□□□ -0.38
Pcdh19Q80TF3 Gm14704-201ENSMUST00000120300 874 ntBASIC12.69□□□□□ -0.38
Pcdh19Q80TF3 Gm11658-201ENSMUST00000120913 1008 ntBASIC12.69□□□□□ -0.38
Pcdh19Q80TF3 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC12.69□□□□□ -0.38
Pcdh19Q80TF3 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdh19Q80TF3 Gm5637-201ENSMUST00000153890 1119 ntBASIC12.69□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms