Protein–RNA interactions for Protein: Q80T11

Ush1g, Usher syndrome type-1G protein homolog, mousemouse

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush1gQ80T11 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ush1gQ80T11 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ush1gQ80T11 Gm44065-201ENSMUST00000203184 3527 ntBASIC14.18□□□□□ -0.14
Ush1gQ80T11 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ush1gQ80T11 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ush1gQ80T11 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
Ush1gQ80T11 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC14.17□□□□□ -0.14
Ush1gQ80T11 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC14.17□□□□□ -0.14
Ush1gQ80T11 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Ush1gQ80T11 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ush1gQ80T11 AC122314.1-201ENSMUST00000223056 2239 ntBASIC14.17□□□□□ -0.14
Ush1gQ80T11 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ush1gQ80T11 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ush1gQ80T11 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ush1gQ80T11 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC14.17□□□□□ -0.14
Ush1gQ80T11 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Ush1gQ80T11 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Ush1gQ80T11 Mir7221-201ENSMUST00000184009 72 ntBASIC14.17□□□□□ -0.14
Ush1gQ80T11 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC14.17□□□□□ -0.14
Ush1gQ80T11 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC14.17□□□□□ -0.14
Ush1gQ80T11 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC14.17□□□□□ -0.14
Ush1gQ80T11 AC122305.4-201ENSMUST00000216159 1206 ntBASIC14.17□□□□□ -0.14
Ush1gQ80T11 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC14.17□□□□□ -0.14
Ush1gQ80T11 CT025533.2-201ENSMUST00000228715 1248 ntBASIC14.17□□□□□ -0.14
Ush1gQ80T11 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ush1gQ80T11 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ush1gQ80T11 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Ush1gQ80T11 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ush1gQ80T11 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ush1gQ80T11 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ush1gQ80T11 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ush1gQ80T11 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ush1gQ80T11 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ush1gQ80T11 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ush1gQ80T11 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
Ush1gQ80T11 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ush1gQ80T11 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ush1gQ80T11 Gm6015-201ENSMUST00000217493 1586 ntBASIC14.17□□□□□ -0.14
Ush1gQ80T11 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ush1gQ80T11 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ush1gQ80T11 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ush1gQ80T11 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ush1gQ80T11 Gm43423-201ENSMUST00000198390 2094 ntBASIC14.16□□□□□ -0.14
Ush1gQ80T11 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ush1gQ80T11 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ush1gQ80T11 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ush1gQ80T11 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC14.16□□□□□ -0.14
Ush1gQ80T11 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ush1gQ80T11 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Ush1gQ80T11 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
Ush1gQ80T11 Mir874-201ENSMUST00000104769 76 ntBASIC14.16□□□□□ -0.14
Ush1gQ80T11 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Ush1gQ80T11 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ush1gQ80T11 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Ush1gQ80T11 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC14.16□□□□□ -0.14
Ush1gQ80T11 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ush1gQ80T11 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Ush1gQ80T11 Gm43138-201ENSMUST00000199123 708 ntBASIC14.16□□□□□ -0.14
Ush1gQ80T11 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC14.16□□□□□ -0.14
Ush1gQ80T11 Gm3786-201ENSMUST00000202659 378 ntBASIC14.16□□□□□ -0.14
Ush1gQ80T11 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ush1gQ80T11 Gm6458-201ENSMUST00000211573 635 ntBASIC14.16□□□□□ -0.14
Ush1gQ80T11 CT030182.1-201ENSMUST00000225935 533 ntBASIC14.16□□□□□ -0.14
Ush1gQ80T11 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Ush1gQ80T11 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Ush1gQ80T11 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ush1gQ80T11 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Ush1gQ80T11 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ush1gQ80T11 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ush1gQ80T11 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ush1gQ80T11 AC139054.1-201ENSMUST00000226898 1598 ntBASIC14.16□□□□□ -0.14
Ush1gQ80T11 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ush1gQ80T11 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Ush1gQ80T11 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Ush1gQ80T11 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC14.16□□□□□ -0.14
Ush1gQ80T11 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Ush1gQ80T11 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Ush1gQ80T11 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ush1gQ80T11 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ush1gQ80T11 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ush1gQ80T11 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ush1gQ80T11 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Ush1gQ80T11 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ush1gQ80T11 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ush1gQ80T11 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ush1gQ80T11 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ush1gQ80T11 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ush1gQ80T11 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ush1gQ80T11 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ush1gQ80T11 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ush1gQ80T11 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ush1gQ80T11 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC14.15□□□□□ -0.14
Ush1gQ80T11 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ush1gQ80T11 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ush1gQ80T11 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC14.15□□□□□ -0.14
Ush1gQ80T11 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Ush1gQ80T11 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ush1gQ80T11 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Ush1gQ80T11 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ush1gQ80T11 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 46.4 ms