Protein–RNA interactions for Protein: Q80SX8

Pif1, ATP-dependent DNA helicase PIF1, mousemouse

Predictions only

Length 650 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pif1Q80SX8 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Pif1Q80SX8 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Pif1Q80SX8 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
Pif1Q80SX8 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Pif1Q80SX8 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Pif1Q80SX8 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Pif1Q80SX8 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pif1Q80SX8 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Pif1Q80SX8 Gm37644-201ENSMUST00000192190 2270 ntBASIC12.02□□□□□ -0.49
Pif1Q80SX8 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pif1Q80SX8 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pif1Q80SX8 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pif1Q80SX8 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pif1Q80SX8 Gm12363-201ENSMUST00000122250 668 ntBASIC12.02□□□□□ -0.49
Pif1Q80SX8 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC12.02□□□□□ -0.49
Pif1Q80SX8 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Pif1Q80SX8 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Pif1Q80SX8 Gm20482-202ENSMUST00000174729 825 ntBASIC12.02□□□□□ -0.49
Pif1Q80SX8 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC12.02□□□□□ -0.49
Pif1Q80SX8 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Pif1Q80SX8 Gm18584-201ENSMUST00000203098 964 ntBASIC12.02□□□□□ -0.49
Pif1Q80SX8 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC12.02□□□□□ -0.49
Pif1Q80SX8 Gm40383-201ENSMUST00000222601 610 ntTSL 5 BASIC12.02□□□□□ -0.49
Pif1Q80SX8 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pif1Q80SX8 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Pif1Q80SX8 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC12.02□□□□□ -0.49
Pif1Q80SX8 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pif1Q80SX8 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pif1Q80SX8 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pif1Q80SX8 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Pif1Q80SX8 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Pif1Q80SX8 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC12.02□□□□□ -0.49
Pif1Q80SX8 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC12.02□□□□□ -0.49
Pif1Q80SX8 AC117194.1-201ENSMUST00000224847 3002 ntBASIC12.02□□□□□ -0.49
Pif1Q80SX8 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pif1Q80SX8 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Pif1Q80SX8 Gm44207-201ENSMUST00000204568 1424 ntBASIC12.02□□□□□ -0.49
Pif1Q80SX8 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pif1Q80SX8 Gm7899-201ENSMUST00000192935 1897 ntBASIC12.02□□□□□ -0.49
Pif1Q80SX8 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pif1Q80SX8 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Pif1Q80SX8 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC12.02□□□□□ -0.49
Pif1Q80SX8 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pif1Q80SX8 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Pif1Q80SX8 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC12.01□□□□□ -0.49
Pif1Q80SX8 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pif1Q80SX8 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Pif1Q80SX8 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC12.01□□□□□ -0.49
Pif1Q80SX8 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Pif1Q80SX8 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pif1Q80SX8 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC12.01□□□□□ -0.49
Pif1Q80SX8 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pif1Q80SX8 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pif1Q80SX8 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Pif1Q80SX8 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC12.01□□□□□ -0.49
Pif1Q80SX8 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pif1Q80SX8 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Pif1Q80SX8 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pif1Q80SX8 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pif1Q80SX8 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pif1Q80SX8 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pif1Q80SX8 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pif1Q80SX8 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Pif1Q80SX8 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC12.01□□□□□ -0.49
Pif1Q80SX8 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pif1Q80SX8 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pif1Q80SX8 Gng7-205ENSMUST00000118465 875 ntAPPRIS ALT1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pif1Q80SX8 Gm12539-201ENSMUST00000121549 1098 ntBASIC12.01□□□□□ -0.49
Pif1Q80SX8 Gm12749-201ENSMUST00000122138 1159 ntBASIC12.01□□□□□ -0.49
Pif1Q80SX8 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Pif1Q80SX8 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
Pif1Q80SX8 Gm25668-201ENSMUST00000157700 129 ntBASIC12.01□□□□□ -0.49
Pif1Q80SX8 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC12.01□□□□□ -0.49
Pif1Q80SX8 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Pif1Q80SX8 Gm17376-201ENSMUST00000166016 84 ntBASIC12.01□□□□□ -0.49
Pif1Q80SX8 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Pif1Q80SX8 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
Pif1Q80SX8 Gm45609-206ENSMUST00000210176 1023 ntTSL 5 BASIC12.01□□□□□ -0.49
Pif1Q80SX8 Gm6082-201ENSMUST00000215204 454 ntBASIC12.01□□□□□ -0.49
Pif1Q80SX8 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pif1Q80SX8 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pif1Q80SX8 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Pif1Q80SX8 Gm11685-201ENSMUST00000141559 1332 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Pif1Q80SX8 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pif1Q80SX8 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pif1Q80SX8 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pif1Q80SX8 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pif1Q80SX8 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pif1Q80SX8 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Pif1Q80SX8 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC12.01□□□□□ -0.49
Pif1Q80SX8 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Pif1Q80SX8 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pif1Q80SX8 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pif1Q80SX8 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pif1Q80SX8 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Pif1Q80SX8 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Pif1Q80SX8 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pif1Q80SX8 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Pif1Q80SX8 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pif1Q80SX8 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 54.4 ms