Protein–RNA interactions for Protein: Q7TSK3

Pcdh8, Protocadherin-8, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh8Q7TSK3 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC12.79□□□□□ -0.36
Pcdh8Q7TSK3 Gm45930-201ENSMUST00000221330 292 ntBASIC12.79□□□□□ -0.36
Pcdh8Q7TSK3 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdh8Q7TSK3 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdh8Q7TSK3 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdh8Q7TSK3 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdh8Q7TSK3 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdh8Q7TSK3 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdh8Q7TSK3 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdh8Q7TSK3 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdh8Q7TSK3 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdh8Q7TSK3 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdh8Q7TSK3 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdh8Q7TSK3 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Pcdh8Q7TSK3 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC12.79□□□□□ -0.36
Pcdh8Q7TSK3 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdh8Q7TSK3 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdh8Q7TSK3 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdh8Q7TSK3 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdh8Q7TSK3 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdh8Q7TSK3 Gm7002-201ENSMUST00000221386 2165 ntBASIC12.79□□□□□ -0.36
Pcdh8Q7TSK3 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdh8Q7TSK3 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdh8Q7TSK3 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdh8Q7TSK3 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdh8Q7TSK3 Gm37324-201ENSMUST00000194500 4504 ntBASIC12.78□□□□□ -0.36
Pcdh8Q7TSK3 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdh8Q7TSK3 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC12.78□□□□□ -0.36
Pcdh8Q7TSK3 AC153366.2-201ENSMUST00000219461 1984 ntBASIC12.78□□□□□ -0.36
Pcdh8Q7TSK3 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdh8Q7TSK3 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdh8Q7TSK3 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC12.78□□□□□ -0.36
Pcdh8Q7TSK3 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC12.78□□□□□ -0.36
Pcdh8Q7TSK3 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdh8Q7TSK3 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC12.78□□□□□ -0.36
Pcdh8Q7TSK3 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC12.78□□□□□ -0.36
Pcdh8Q7TSK3 Gm6023-201ENSMUST00000118217 606 ntBASIC12.78□□□□□ -0.36
Pcdh8Q7TSK3 Gm11793-201ENSMUST00000120433 981 ntBASIC12.78□□□□□ -0.36
Pcdh8Q7TSK3 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC12.78□□□□□ -0.36
Pcdh8Q7TSK3 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdh8Q7TSK3 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdh8Q7TSK3 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC12.78□□□□□ -0.36
Pcdh8Q7TSK3 Gm6222-202ENSMUST00000182143 629 ntBASIC12.78□□□□□ -0.36
Pcdh8Q7TSK3 Gm5850-201ENSMUST00000192923 1206 ntBASIC12.78□□□□□ -0.36
Pcdh8Q7TSK3 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdh8Q7TSK3 Gm4768-201ENSMUST00000206199 686 ntBASIC12.78□□□□□ -0.36
Pcdh8Q7TSK3 Gm9368-201ENSMUST00000219348 831 ntBASIC12.78□□□□□ -0.36
Pcdh8Q7TSK3 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC12.78□□□□□ -0.36
Pcdh8Q7TSK3 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdh8Q7TSK3 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdh8Q7TSK3 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdh8Q7TSK3 Gm44891-201ENSMUST00000208817 2223 ntBASIC12.78□□□□□ -0.36
Pcdh8Q7TSK3 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Pcdh8Q7TSK3 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC12.78□□□□□ -0.36
Pcdh8Q7TSK3 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdh8Q7TSK3 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdh8Q7TSK3 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdh8Q7TSK3 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdh8Q7TSK3 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdh8Q7TSK3 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdh8Q7TSK3 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdh8Q7TSK3 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdh8Q7TSK3 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Pcdh8Q7TSK3 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Pcdh8Q7TSK3 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
Pcdh8Q7TSK3 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
Pcdh8Q7TSK3 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Pcdh8Q7TSK3 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Pcdh8Q7TSK3 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC12.77□□□□□ -0.36
Pcdh8Q7TSK3 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Pcdh8Q7TSK3 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Pcdh8Q7TSK3 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Pcdh8Q7TSK3 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Pcdh8Q7TSK3 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Pcdh8Q7TSK3 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
Pcdh8Q7TSK3 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Pcdh8Q7TSK3 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Pcdh8Q7TSK3 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdh8Q7TSK3 Gm12241-201ENSMUST00000118330 726 ntBASIC12.77□□□□□ -0.37
Pcdh8Q7TSK3 Gm13342-201ENSMUST00000121055 207 ntBASIC12.77□□□□□ -0.37
Pcdh8Q7TSK3 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC12.77□□□□□ -0.37
Pcdh8Q7TSK3 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdh8Q7TSK3 Mir8109-201ENSMUST00000184375 117 ntBASIC12.77□□□□□ -0.37
Pcdh8Q7TSK3 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC12.77□□□□□ -0.37
Pcdh8Q7TSK3 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC12.77□□□□□ -0.37
Pcdh8Q7TSK3 Olfr284-202ENSMUST00000206647 966 ntBASIC12.77□□□□□ -0.37
Pcdh8Q7TSK3 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC12.77□□□□□ -0.37
Pcdh8Q7TSK3 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC12.77□□□□□ -0.37
Pcdh8Q7TSK3 n-R5s195-201ENSMUST00000082891 119 ntBASIC12.77□□□□□ -0.37
Pcdh8Q7TSK3 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Pcdh8Q7TSK3 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Pcdh8Q7TSK3 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdh8Q7TSK3 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdh8Q7TSK3 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdh8Q7TSK3 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdh8Q7TSK3 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdh8Q7TSK3 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Pcdh8Q7TSK3 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdh8Q7TSK3 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdh8Q7TSK3 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms