Protein–RNA interactions for Protein: Q7M732

Rtl1, Retrotransposon-like protein 1, mousemouse

Predictions only

Length 1,744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtl1Q7M732 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.23
Rtl1Q7M732 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC22.76■■□□□ 1.23
Rtl1Q7M732 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC22.76■■□□□ 1.23
Rtl1Q7M732 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC22.76■■□□□ 1.23
Rtl1Q7M732 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC22.76■■□□□ 1.23
Rtl1Q7M732 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC22.76■■□□□ 1.23
Rtl1Q7M732 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
Rtl1Q7M732 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC22.76■■□□□ 1.23
Rtl1Q7M732 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Rtl1Q7M732 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC22.76■■□□□ 1.23
Rtl1Q7M732 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
Rtl1Q7M732 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC22.76■■□□□ 1.23
Rtl1Q7M732 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC22.76■■□□□ 1.23
Rtl1Q7M732 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
Rtl1Q7M732 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
Rtl1Q7M732 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC22.76■■□□□ 1.23
Rtl1Q7M732 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC22.76■■□□□ 1.23
Rtl1Q7M732 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC22.76■■□□□ 1.23
Rtl1Q7M732 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
Rtl1Q7M732 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC22.76■■□□□ 1.23
Rtl1Q7M732 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Rtl1Q7M732 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Rtl1Q7M732 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC22.75■■□□□ 1.23
Rtl1Q7M732 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Rtl1Q7M732 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
Rtl1Q7M732 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC22.75■■□□□ 1.23
Rtl1Q7M732 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
Rtl1Q7M732 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Rtl1Q7M732 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Rtl1Q7M732 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Rtl1Q7M732 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Rtl1Q7M732 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC22.75■■□□□ 1.23
Rtl1Q7M732 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC22.75■■□□□ 1.23
Rtl1Q7M732 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Rtl1Q7M732 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
Rtl1Q7M732 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC22.75■■□□□ 1.23
Rtl1Q7M732 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
Rtl1Q7M732 Gm17435-202ENSMUST00000212699 1998 ntBASIC22.75■■□□□ 1.23
Rtl1Q7M732 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Rtl1Q7M732 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Rtl1Q7M732 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC22.74■■□□□ 1.23
Rtl1Q7M732 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
Rtl1Q7M732 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC22.74■■□□□ 1.23
Rtl1Q7M732 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
Rtl1Q7M732 Gm9445-201ENSMUST00000207454 1285 ntBASIC22.74■■□□□ 1.23
Rtl1Q7M732 AC125108.1-201ENSMUST00000218986 2330 ntBASIC22.74■■□□□ 1.23
Rtl1Q7M732 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Rtl1Q7M732 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC22.74■■□□□ 1.23
Rtl1Q7M732 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Rtl1Q7M732 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC22.74■■□□□ 1.23
Rtl1Q7M732 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC22.74■■□□□ 1.23
Rtl1Q7M732 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
Rtl1Q7M732 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
Rtl1Q7M732 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC22.74■■□□□ 1.23
Rtl1Q7M732 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
Rtl1Q7M732 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC22.74■■□□□ 1.23
Rtl1Q7M732 Gm6015-201ENSMUST00000217493 1586 ntBASIC22.74■■□□□ 1.23
Rtl1Q7M732 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Rtl1Q7M732 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC22.74■■□□□ 1.23
Rtl1Q7M732 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
Rtl1Q7M732 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Rtl1Q7M732 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Rtl1Q7M732 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC22.74■■□□□ 1.23
Rtl1Q7M732 Gm4760-201ENSMUST00000119663 1030 ntBASIC22.74■■□□□ 1.23
Rtl1Q7M732 Gm4819-201ENSMUST00000182170 1009 ntBASIC22.74■■□□□ 1.23
Rtl1Q7M732 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
Rtl1Q7M732 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC22.74■■□□□ 1.23
Rtl1Q7M732 Rps4l-202ENSMUST00000204242 789 ntBASIC22.74■■□□□ 1.23
Rtl1Q7M732 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
Rtl1Q7M732 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC22.74■■□□□ 1.23
Rtl1Q7M732 CT573034.1-201ENSMUST00000222983 313 ntBASIC22.74■■□□□ 1.23
Rtl1Q7M732 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
Rtl1Q7M732 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Rtl1Q7M732 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC22.73■■□□□ 1.23
Rtl1Q7M732 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Rtl1Q7M732 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC22.73■■□□□ 1.23
Rtl1Q7M732 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
Rtl1Q7M732 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Rtl1Q7M732 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
Rtl1Q7M732 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC22.73■■□□□ 1.23
Rtl1Q7M732 Rmrp-201ENSMUST00000157463 271 ntBASIC22.73■■□□□ 1.23
Rtl1Q7M732 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC22.73■■□□□ 1.23
Rtl1Q7M732 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC22.73■■□□□ 1.23
Rtl1Q7M732 AL732506.1-201ENSMUST00000226420 281 ntBASIC22.73■■□□□ 1.23
Rtl1Q7M732 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC22.73■■□□□ 1.23
Rtl1Q7M732 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Rtl1Q7M732 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC22.72■■□□□ 1.23
Rtl1Q7M732 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Rtl1Q7M732 Retreg1-206ENSMUST00000228306 1430 ntBASIC22.72■■□□□ 1.23
Rtl1Q7M732 Rnf17-202ENSMUST00000223627 2077 ntBASIC22.72■■□□□ 1.23
Rtl1Q7M732 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC22.72■■□□□ 1.23
Rtl1Q7M732 Gng7-205ENSMUST00000118465 875 ntAPPRIS ALT1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Rtl1Q7M732 Gm14832-201ENSMUST00000121289 322 ntBASIC22.72■■□□□ 1.23
Rtl1Q7M732 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC22.72■■□□□ 1.23
Rtl1Q7M732 Gm44124-201ENSMUST00000204159 472 ntBASIC22.72■■□□□ 1.23
Rtl1Q7M732 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Rtl1Q7M732 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC22.72■■□□□ 1.23
Rtl1Q7M732 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC22.72■■□□□ 1.23
Rtl1Q7M732 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC22.72■■□□□ 1.23
Rtl1Q7M732 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC22.72■■□□□ 1.23
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms