Protein–RNA interactions for Protein: Q6PFE3

Rad54b, DNA repair and recombination protein RAD54B, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rad54bQ6PFE3 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC13.04□□□□□ -0.32
Rad54bQ6PFE3 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC13.04□□□□□ -0.32
Rad54bQ6PFE3 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Rad54bQ6PFE3 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Rad54bQ6PFE3 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC13.04□□□□□ -0.32
Rad54bQ6PFE3 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC13.04□□□□□ -0.32
Rad54bQ6PFE3 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC13.04□□□□□ -0.32
Rad54bQ6PFE3 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rad54bQ6PFE3 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Rad54bQ6PFE3 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rad54bQ6PFE3 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rad54bQ6PFE3 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Rad54bQ6PFE3 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rad54bQ6PFE3 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC13.04□□□□□ -0.32
Rad54bQ6PFE3 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Rad54bQ6PFE3 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rad54bQ6PFE3 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rad54bQ6PFE3 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Rad54bQ6PFE3 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rad54bQ6PFE3 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Rad54bQ6PFE3 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rad54bQ6PFE3 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rad54bQ6PFE3 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rad54bQ6PFE3 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Rad54bQ6PFE3 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Rad54bQ6PFE3 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rad54bQ6PFE3 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rad54bQ6PFE3 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Rad54bQ6PFE3 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Rad54bQ6PFE3 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rad54bQ6PFE3 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rad54bQ6PFE3 Gm6152-201ENSMUST00000151704 340 ntBASIC13.03□□□□□ -0.32
Rad54bQ6PFE3 Gm16215-201ENSMUST00000161990 637 ntBASIC13.03□□□□□ -0.32
Rad54bQ6PFE3 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rad54bQ6PFE3 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC13.03□□□□□ -0.32
Rad54bQ6PFE3 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Rad54bQ6PFE3 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Rad54bQ6PFE3 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Rad54bQ6PFE3 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rad54bQ6PFE3 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rad54bQ6PFE3 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rad54bQ6PFE3 Gm16372-201ENSMUST00000073088 450 ntBASIC13.03□□□□□ -0.32
Rad54bQ6PFE3 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rad54bQ6PFE3 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rad54bQ6PFE3 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rad54bQ6PFE3 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Rad54bQ6PFE3 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rad54bQ6PFE3 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rad54bQ6PFE3 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rad54bQ6PFE3 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rad54bQ6PFE3 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Rad54bQ6PFE3 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Rad54bQ6PFE3 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rad54bQ6PFE3 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Rad54bQ6PFE3 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Rad54bQ6PFE3 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Rad54bQ6PFE3 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Rad54bQ6PFE3 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Rad54bQ6PFE3 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Rad54bQ6PFE3 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rad54bQ6PFE3 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rad54bQ6PFE3 Gm44758-201ENSMUST00000206096 2068 ntBASIC13.02□□□□□ -0.33
Rad54bQ6PFE3 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rad54bQ6PFE3 Gm15429-201ENSMUST00000151268 798 ntBASIC13.02□□□□□ -0.33
Rad54bQ6PFE3 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Rad54bQ6PFE3 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.33
Rad54bQ6PFE3 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC13.02□□□□□ -0.33
Rad54bQ6PFE3 Gm28693-202ENSMUST00000190758 331 ntBASIC13.02□□□□□ -0.33
Rad54bQ6PFE3 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC13.02□□□□□ -0.33
Rad54bQ6PFE3 Gm6218-201ENSMUST00000219812 628 ntBASIC13.02□□□□□ -0.33
Rad54bQ6PFE3 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rad54bQ6PFE3 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Rad54bQ6PFE3 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rad54bQ6PFE3 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rad54bQ6PFE3 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rad54bQ6PFE3 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Rad54bQ6PFE3 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rad54bQ6PFE3 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC13.02□□□□□ -0.33
Rad54bQ6PFE3 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rad54bQ6PFE3 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rad54bQ6PFE3 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rad54bQ6PFE3 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rad54bQ6PFE3 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rad54bQ6PFE3 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rad54bQ6PFE3 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Rad54bQ6PFE3 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rad54bQ6PFE3 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Rad54bQ6PFE3 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Rad54bQ6PFE3 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rad54bQ6PFE3 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rad54bQ6PFE3 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rad54bQ6PFE3 Gm31518-201ENSMUST00000211925 2548 ntTSL 5 BASIC13.01□□□□□ -0.33
Rad54bQ6PFE3 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rad54bQ6PFE3 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rad54bQ6PFE3 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rad54bQ6PFE3 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rad54bQ6PFE3 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Rad54bQ6PFE3 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rad54bQ6PFE3 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rad54bQ6PFE3 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms