Protein–RNA interactions for Protein: Q6P5D8

Smchd1, Structural maintenance of chromosomes flexible hinge domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 2,007 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smchd1Q6P5D8 Gm14109-201ENSMUST00000118814 309 ntBASIC14.12□□□□□ -0.15
Smchd1Q6P5D8 Gm14726-201ENSMUST00000120623 896 ntBASIC14.12□□□□□ -0.15
Smchd1Q6P5D8 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
Smchd1Q6P5D8 Gm8908-201ENSMUST00000121633 1024 ntBASIC14.12□□□□□ -0.15
Smchd1Q6P5D8 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Smchd1Q6P5D8 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Smchd1Q6P5D8 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC14.12□□□□□ -0.15
Smchd1Q6P5D8 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC14.12□□□□□ -0.15
Smchd1Q6P5D8 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Smchd1Q6P5D8 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Smchd1Q6P5D8 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Smchd1Q6P5D8 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Smchd1Q6P5D8 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC14.11□□□□□ -0.15
Smchd1Q6P5D8 Gm37644-201ENSMUST00000192190 2270 ntBASIC14.11□□□□□ -0.15
Smchd1Q6P5D8 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Smchd1Q6P5D8 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Smchd1Q6P5D8 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Smchd1Q6P5D8 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Smchd1Q6P5D8 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Smchd1Q6P5D8 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC14.11□□□□□ -0.15
Smchd1Q6P5D8 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Smchd1Q6P5D8 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Smchd1Q6P5D8 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Smchd1Q6P5D8 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC14.11□□□□□ -0.15
Smchd1Q6P5D8 Gm24830-201ENSMUST00000102024 166 ntBASIC14.11□□□□□ -0.15
Smchd1Q6P5D8 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC14.11□□□□□ -0.15
Smchd1Q6P5D8 Gm25890-201ENSMUST00000177643 165 ntBASIC14.11□□□□□ -0.15
Smchd1Q6P5D8 Rnu1b2-201ENSMUST00000178073 165 ntBASIC14.11□□□□□ -0.15
Smchd1Q6P5D8 Rnu1b1-201ENSMUST00000178250 165 ntBASIC14.11□□□□□ -0.15
Smchd1Q6P5D8 Gm22614-201ENSMUST00000178300 165 ntBASIC14.11□□□□□ -0.15
Smchd1Q6P5D8 Gm26956-201ENSMUST00000182176 986 ntBASIC14.11□□□□□ -0.15
Smchd1Q6P5D8 Ighv5-7-201ENSMUST00000192302 244 ntBASIC14.11□□□□□ -0.15
Smchd1Q6P5D8 Gm37466-201ENSMUST00000195692 652 ntBASIC14.11□□□□□ -0.15
Smchd1Q6P5D8 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC14.11□□□□□ -0.15
Smchd1Q6P5D8 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC14.11□□□□□ -0.15
Smchd1Q6P5D8 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Smchd1Q6P5D8 AC126253.1-202ENSMUST00000226732 835 ntBASIC14.11□□□□□ -0.15
Smchd1Q6P5D8 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Smchd1Q6P5D8 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Smchd1Q6P5D8 Gm22042-201ENSMUST00000082989 165 ntBASIC14.11□□□□□ -0.15
Smchd1Q6P5D8 Gm26232-201ENSMUST00000083360 166 ntBASIC14.11□□□□□ -0.15
Smchd1Q6P5D8 Gm24136-201ENSMUST00000083374 165 ntBASIC14.11□□□□□ -0.15
Smchd1Q6P5D8 Rnu1b6-201ENSMUST00000083839 166 ntBASIC14.11□□□□□ -0.15
Smchd1Q6P5D8 Gm26110-201ENSMUST00000083971 165 ntBASIC14.11□□□□□ -0.15
Smchd1Q6P5D8 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Smchd1Q6P5D8 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Smchd1Q6P5D8 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Smchd1Q6P5D8 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Smchd1Q6P5D8 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Smchd1Q6P5D8 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Smchd1Q6P5D8 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Smchd1Q6P5D8 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Smchd1Q6P5D8 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC14.11□□□□□ -0.15
Smchd1Q6P5D8 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Smchd1Q6P5D8 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Smchd1Q6P5D8 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Smchd1Q6P5D8 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Smchd1Q6P5D8 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
Smchd1Q6P5D8 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Smchd1Q6P5D8 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC14.1□□□□□ -0.15
Smchd1Q6P5D8 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC14.1□□□□□ -0.15
Smchd1Q6P5D8 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
Smchd1Q6P5D8 Gm45224-201ENSMUST00000208203 414 ntBASIC14.1□□□□□ -0.15
Smchd1Q6P5D8 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Smchd1Q6P5D8 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Smchd1Q6P5D8 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Smchd1Q6P5D8 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Smchd1Q6P5D8 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Smchd1Q6P5D8 AC123857.2-201ENSMUST00000225756 1582 ntBASIC14.1□□□□□ -0.15
Smchd1Q6P5D8 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Smchd1Q6P5D8 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
Smchd1Q6P5D8 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Smchd1Q6P5D8 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC14.1□□□□□ -0.15
Smchd1Q6P5D8 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC14.1□□□□□ -0.15
Smchd1Q6P5D8 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Smchd1Q6P5D8 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Smchd1Q6P5D8 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC14.1□□□□□ -0.15
Smchd1Q6P5D8 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Smchd1Q6P5D8 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Smchd1Q6P5D8 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Smchd1Q6P5D8 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Smchd1Q6P5D8 Mir877-201ENSMUST00000104738 85 ntBASIC14.1□□□□□ -0.15
Smchd1Q6P5D8 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Smchd1Q6P5D8 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Smchd1Q6P5D8 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Smchd1Q6P5D8 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC14.1□□□□□ -0.15
Smchd1Q6P5D8 Mir7070-201ENSMUST00000183657 86 ntBASIC14.1□□□□□ -0.15
Smchd1Q6P5D8 Gm38317-201ENSMUST00000195564 343 ntBASIC14.1□□□□□ -0.15
Smchd1Q6P5D8 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC14.1□□□□□ -0.15
Smchd1Q6P5D8 Gm44405-201ENSMUST00000198952 126 ntBASIC14.1□□□□□ -0.15
Smchd1Q6P5D8 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC14.1□□□□□ -0.15
Smchd1Q6P5D8 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC14.1□□□□□ -0.15
Smchd1Q6P5D8 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Smchd1Q6P5D8 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Smchd1Q6P5D8 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Smchd1Q6P5D8 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Smchd1Q6P5D8 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Smchd1Q6P5D8 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Smchd1Q6P5D8 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Smchd1Q6P5D8 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 87.2 ms