Protein–RNA interactions for Protein: Q6P2L7

Casc4, Protein CASC4, mousemouse

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Casc4Q6P2L7 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Casc4Q6P2L7 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Casc4Q6P2L7 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Casc4Q6P2L7 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Casc4Q6P2L7 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Casc4Q6P2L7 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Casc4Q6P2L7 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Casc4Q6P2L7 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Casc4Q6P2L7 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC13.13□□□□□ -0.31
Casc4Q6P2L7 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Casc4Q6P2L7 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Casc4Q6P2L7 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Casc4Q6P2L7 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Casc4Q6P2L7 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC13.13□□□□□ -0.31
Casc4Q6P2L7 Gm15459-201ENSMUST00000117405 1941 ntBASIC13.13□□□□□ -0.31
Casc4Q6P2L7 Gm8355-201ENSMUST00000177767 1941 ntBASIC13.13□□□□□ -0.31
Casc4Q6P2L7 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Casc4Q6P2L7 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Casc4Q6P2L7 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Casc4Q6P2L7 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Casc4Q6P2L7 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Casc4Q6P2L7 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Casc4Q6P2L7 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Casc4Q6P2L7 Gm44401-201ENSMUST00000204462 2375 ntBASIC13.13□□□□□ -0.31
Casc4Q6P2L7 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC13.13□□□□□ -0.31
Casc4Q6P2L7 Gm10176-201ENSMUST00000159707 2264 ntBASIC13.13□□□□□ -0.31
Casc4Q6P2L7 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Casc4Q6P2L7 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Casc4Q6P2L7 Gm12390-201ENSMUST00000117897 397 ntBASIC13.13□□□□□ -0.31
Casc4Q6P2L7 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC13.13□□□□□ -0.31
Casc4Q6P2L7 Gm15824-201ENSMUST00000119516 955 ntBASIC13.13□□□□□ -0.31
Casc4Q6P2L7 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Casc4Q6P2L7 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC13.13□□□□□ -0.31
Casc4Q6P2L7 Gm24644-201ENSMUST00000157114 139 ntBASIC13.13□□□□□ -0.31
Casc4Q6P2L7 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Casc4Q6P2L7 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Casc4Q6P2L7 Gm29649-201ENSMUST00000185649 419 ntBASIC13.13□□□□□ -0.31
Casc4Q6P2L7 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC13.13□□□□□ -0.31
Casc4Q6P2L7 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC13.13□□□□□ -0.31
Casc4Q6P2L7 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC13.13□□□□□ -0.31
Casc4Q6P2L7 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Casc4Q6P2L7 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC13.13□□□□□ -0.31
Casc4Q6P2L7 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Casc4Q6P2L7 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Casc4Q6P2L7 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Casc4Q6P2L7 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Casc4Q6P2L7 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Casc4Q6P2L7 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Casc4Q6P2L7 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Casc4Q6P2L7 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Casc4Q6P2L7 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Casc4Q6P2L7 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Casc4Q6P2L7 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC13.13□□□□□ -0.31
Casc4Q6P2L7 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC13.13□□□□□ -0.31
Casc4Q6P2L7 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Casc4Q6P2L7 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC13.13□□□□□ -0.31
Casc4Q6P2L7 AC137842.1-201ENSMUST00000227896 2064 ntBASIC13.12□□□□□ -0.31
Casc4Q6P2L7 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Casc4Q6P2L7 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Casc4Q6P2L7 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Casc4Q6P2L7 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC13.12□□□□□ -0.31
Casc4Q6P2L7 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Casc4Q6P2L7 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Casc4Q6P2L7 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Casc4Q6P2L7 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Casc4Q6P2L7 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Casc4Q6P2L7 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Casc4Q6P2L7 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC13.12□□□□□ -0.31
Casc4Q6P2L7 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Casc4Q6P2L7 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Casc4Q6P2L7 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Casc4Q6P2L7 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC13.12□□□□□ -0.31
Casc4Q6P2L7 Gm8805-201ENSMUST00000117848 313 ntBASIC13.12□□□□□ -0.31
Casc4Q6P2L7 Gm25927-201ENSMUST00000175058 117 ntBASIC13.12□□□□□ -0.31
Casc4Q6P2L7 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC13.12□□□□□ -0.31
Casc4Q6P2L7 Gm42442-201ENSMUST00000197951 1133 ntBASIC13.12□□□□□ -0.31
Casc4Q6P2L7 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC13.12□□□□□ -0.31
Casc4Q6P2L7 Gm6266-201ENSMUST00000203844 806 ntBASIC13.12□□□□□ -0.31
Casc4Q6P2L7 AC122305.4-201ENSMUST00000216159 1206 ntBASIC13.12□□□□□ -0.31
Casc4Q6P2L7 AC134254.1-201ENSMUST00000221362 167 ntBASIC13.12□□□□□ -0.31
Casc4Q6P2L7 Cdk7-205ENSMUST00000225990 1159 ntBASIC13.12□□□□□ -0.31
Casc4Q6P2L7 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Casc4Q6P2L7 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Casc4Q6P2L7 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Casc4Q6P2L7 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Casc4Q6P2L7 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC13.12□□□□□ -0.31
Casc4Q6P2L7 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC13.12□□□□□ -0.31
Casc4Q6P2L7 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Casc4Q6P2L7 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Casc4Q6P2L7 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Casc4Q6P2L7 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Casc4Q6P2L7 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Casc4Q6P2L7 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Casc4Q6P2L7 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Casc4Q6P2L7 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Casc4Q6P2L7 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Casc4Q6P2L7 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Casc4Q6P2L7 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Casc4Q6P2L7 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Casc4Q6P2L7 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms