Protein–RNA interactions for Protein: Q6P1D7

Slx4, Structure-specific endonuclease subunit SLX4, mousemouse

Predictions only

Length 1,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slx4Q6P1D7 AC153505.1-201ENSMUST00000218819 1071 ntBASIC19.57■□□□□ 0.72
Slx4Q6P1D7 Aamdc-202ENSMUST00000072725 776 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Slx4Q6P1D7 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
Slx4Q6P1D7 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Slx4Q6P1D7 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Slx4Q6P1D7 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Slx4Q6P1D7 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Slx4Q6P1D7 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Slx4Q6P1D7 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC19.57■□□□□ 0.72
Slx4Q6P1D7 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Slx4Q6P1D7 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Slx4Q6P1D7 Gm22133-201ENSMUST00000102082 109 ntBASIC19.57■□□□□ 0.72
Slx4Q6P1D7 Gm23596-201ENSMUST00000104304 132 ntBASIC19.57■□□□□ 0.72
Slx4Q6P1D7 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Slx4Q6P1D7 9430091E24Rik-201ENSMUST00000127301 1067 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Slx4Q6P1D7 CT485607.1-201ENSMUST00000216100 85 ntBASIC19.57■□□□□ 0.72
Slx4Q6P1D7 Ddo-207ENSMUST00000216830 806 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Slx4Q6P1D7 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC19.57■□□□□ 0.72
Slx4Q6P1D7 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Slx4Q6P1D7 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
Slx4Q6P1D7 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Slx4Q6P1D7 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Slx4Q6P1D7 AC169511.2-201ENSMUST00000226674 2063 ntBASIC19.56■□□□□ 0.72
Slx4Q6P1D7 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Slx4Q6P1D7 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC19.56■□□□□ 0.72
Slx4Q6P1D7 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Slx4Q6P1D7 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC19.56■□□□□ 0.72
Slx4Q6P1D7 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
Slx4Q6P1D7 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Slx4Q6P1D7 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC19.56■□□□□ 0.72
Slx4Q6P1D7 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Slx4Q6P1D7 Krtap4-8-201ENSMUST00000107439 983 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Slx4Q6P1D7 Gm23119-201ENSMUST00000158610 140 ntBASIC19.56■□□□□ 0.72
Slx4Q6P1D7 Mocs2-205ENSMUST00000165022 962 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Slx4Q6P1D7 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC19.56■□□□□ 0.72
Slx4Q6P1D7 Gm8492-201ENSMUST00000182375 987 ntBASIC19.56■□□□□ 0.72
Slx4Q6P1D7 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC19.56■□□□□ 0.72
Slx4Q6P1D7 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Slx4Q6P1D7 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Slx4Q6P1D7 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Slx4Q6P1D7 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Slx4Q6P1D7 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
Slx4Q6P1D7 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Slx4Q6P1D7 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Slx4Q6P1D7 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Slx4Q6P1D7 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC19.55■□□□□ 0.72
Slx4Q6P1D7 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
Slx4Q6P1D7 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Slx4Q6P1D7 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Slx4Q6P1D7 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Slx4Q6P1D7 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Slx4Q6P1D7 Mir874-201ENSMUST00000104769 76 ntBASIC19.55■□□□□ 0.72
Slx4Q6P1D7 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC19.55■□□□□ 0.72
Slx4Q6P1D7 Gm13394-201ENSMUST00000121658 1000 ntBASIC19.55■□□□□ 0.72
Slx4Q6P1D7 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC19.55■□□□□ 0.72
Slx4Q6P1D7 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Slx4Q6P1D7 Gm10731-201ENSMUST00000181171 448 ntBASIC19.55■□□□□ 0.72
Slx4Q6P1D7 CT010465.1-201ENSMUST00000222463 809 ntTSL 5 BASIC19.55■□□□□ 0.72
Slx4Q6P1D7 Pisd-ps2-201ENSMUST00000127960 1424 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Slx4Q6P1D7 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Slx4Q6P1D7 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Slx4Q6P1D7 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Slx4Q6P1D7 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Slx4Q6P1D7 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC19.55■□□□□ 0.72
Slx4Q6P1D7 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Slx4Q6P1D7 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC19.55■□□□□ 0.72
Slx4Q6P1D7 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Slx4Q6P1D7 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Slx4Q6P1D7 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
Slx4Q6P1D7 Olfr520-202ENSMUST00000220185 1330 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Slx4Q6P1D7 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Slx4Q6P1D7 Ptges3l-203ENSMUST00000107252 853 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Slx4Q6P1D7 Rpl15-204ENSMUST00000112598 802 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Slx4Q6P1D7 Asb8-202ENSMUST00000123626 1100 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Slx4Q6P1D7 Asb8-203ENSMUST00000123922 1162 ntAPPRIS P1 TSL 3 BASIC19.54■□□□□ 0.72
Slx4Q6P1D7 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Slx4Q6P1D7 Gm10774-201ENSMUST00000188689 204 ntBASIC19.54■□□□□ 0.72
Slx4Q6P1D7 Gm5733-201ENSMUST00000190232 939 ntBASIC19.54■□□□□ 0.72
Slx4Q6P1D7 Gm45909-201ENSMUST00000212413 1031 ntBASIC19.54■□□□□ 0.72
Slx4Q6P1D7 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Slx4Q6P1D7 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Slx4Q6P1D7 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Slx4Q6P1D7 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Slx4Q6P1D7 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Slx4Q6P1D7 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Slx4Q6P1D7 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Slx4Q6P1D7 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Slx4Q6P1D7 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Slx4Q6P1D7 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Slx4Q6P1D7 Gm37165-201ENSMUST00000193815 1463 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Slx4Q6P1D7 Gm38355-201ENSMUST00000192514 1570 ntBASIC19.54■□□□□ 0.72
Slx4Q6P1D7 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Slx4Q6P1D7 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC19.54■□□□□ 0.72
Slx4Q6P1D7 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Slx4Q6P1D7 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Slx4Q6P1D7 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Slx4Q6P1D7 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Slx4Q6P1D7 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Slx4Q6P1D7 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC19.53■□□□□ 0.72
Slx4Q6P1D7 Rab15-203ENSMUST00000121716 739 ntTSL 3 BASIC19.53■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 53.9 ms