Protein–RNA interactions for Protein: Q66PY1

Scube3, Signal peptide, CUB and EGF-like domain-containing protein 3, mousemouse

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scube3Q66PY1 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Scube3Q66PY1 Gm31831-201ENSMUST00000196240 684 ntTSL 3 BASIC13.7□□□□□ -0.22
Scube3Q66PY1 Gm6649-201ENSMUST00000199743 1165 ntBASIC13.7□□□□□ -0.22
Scube3Q66PY1 AC126253.1-201ENSMUST00000227974 824 ntBASIC13.7□□□□□ -0.22
Scube3Q66PY1 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Scube3Q66PY1 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC13.7□□□□□ -0.22
Scube3Q66PY1 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Scube3Q66PY1 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Scube3Q66PY1 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Scube3Q66PY1 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Scube3Q66PY1 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Scube3Q66PY1 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC13.7□□□□□ -0.22
Scube3Q66PY1 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Scube3Q66PY1 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Scube3Q66PY1 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC13.7□□□□□ -0.22
Scube3Q66PY1 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Scube3Q66PY1 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Scube3Q66PY1 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Scube3Q66PY1 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Scube3Q66PY1 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Scube3Q66PY1 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Scube3Q66PY1 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Scube3Q66PY1 Dctn4-202ENSMUST00000223590 1530 ntBASIC13.69□□□□□ -0.22
Scube3Q66PY1 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Scube3Q66PY1 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Scube3Q66PY1 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Scube3Q66PY1 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Scube3Q66PY1 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Scube3Q66PY1 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Scube3Q66PY1 Pcgf5-211ENSMUST00000225920 6443 ntBASIC13.69□□□□□ -0.22
Scube3Q66PY1 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Scube3Q66PY1 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Scube3Q66PY1 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC13.69□□□□□ -0.22
Scube3Q66PY1 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Scube3Q66PY1 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Scube3Q66PY1 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Scube3Q66PY1 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Scube3Q66PY1 Gm12742-201ENSMUST00000117326 410 ntBASIC13.69□□□□□ -0.22
Scube3Q66PY1 Gm11637-201ENSMUST00000120601 592 ntBASIC13.69□□□□□ -0.22
Scube3Q66PY1 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Scube3Q66PY1 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC13.69□□□□□ -0.22
Scube3Q66PY1 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC13.69□□□□□ -0.22
Scube3Q66PY1 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Scube3Q66PY1 Gm26185-201ENSMUST00000157692 266 ntBASIC13.69□□□□□ -0.22
Scube3Q66PY1 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC13.69□□□□□ -0.22
Scube3Q66PY1 Gm26927-201ENSMUST00000182385 965 ntBASIC13.69□□□□□ -0.22
Scube3Q66PY1 Gm38018-201ENSMUST00000195651 540 ntBASIC13.69□□□□□ -0.22
Scube3Q66PY1 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Scube3Q66PY1 Gm43452-201ENSMUST00000201873 991 ntBASIC13.69□□□□□ -0.22
Scube3Q66PY1 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC13.69□□□□□ -0.22
Scube3Q66PY1 Tyms-ps-201ENSMUST00000219550 915 ntBASIC13.69□□□□□ -0.22
Scube3Q66PY1 AC166349.1-201ENSMUST00000220866 695 ntBASIC13.69□□□□□ -0.22
Scube3Q66PY1 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Scube3Q66PY1 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Scube3Q66PY1 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Scube3Q66PY1 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Scube3Q66PY1 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Scube3Q66PY1 Gm9025-201ENSMUST00000122415 1575 ntBASIC13.69□□□□□ -0.22
Scube3Q66PY1 AC113060.1-201ENSMUST00000225689 1573 ntBASIC13.69□□□□□ -0.22
Scube3Q66PY1 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC13.69□□□□□ -0.22
Scube3Q66PY1 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Scube3Q66PY1 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Scube3Q66PY1 Gm43570-201ENSMUST00000199951 3688 ntBASIC13.69□□□□□ -0.22
Scube3Q66PY1 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Scube3Q66PY1 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Scube3Q66PY1 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Scube3Q66PY1 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Scube3Q66PY1 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Scube3Q66PY1 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Scube3Q66PY1 AC131068.2-201ENSMUST00000226175 1453 ntBASIC13.68□□□□□ -0.22
Scube3Q66PY1 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Scube3Q66PY1 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Scube3Q66PY1 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Scube3Q66PY1 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Scube3Q66PY1 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Scube3Q66PY1 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Scube3Q66PY1 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Scube3Q66PY1 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC13.68□□□□□ -0.22
Scube3Q66PY1 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Scube3Q66PY1 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Scube3Q66PY1 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Scube3Q66PY1 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Scube3Q66PY1 Mir686-201ENSMUST00000102174 109 ntBASIC13.68□□□□□ -0.22
Scube3Q66PY1 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Scube3Q66PY1 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC13.68□□□□□ -0.22
Scube3Q66PY1 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Scube3Q66PY1 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC13.68□□□□□ -0.22
Scube3Q66PY1 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Scube3Q66PY1 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Scube3Q66PY1 Vmn1r185-201ENSMUST00000171039 1144 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Scube3Q66PY1 Gm22119-201ENSMUST00000175594 99 ntBASIC13.68□□□□□ -0.22
Scube3Q66PY1 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Scube3Q66PY1 Gm43049-202ENSMUST00000198942 559 ntTSL 2 BASIC13.68□□□□□ -0.22
Scube3Q66PY1 AC129597.1-201ENSMUST00000223046 1234 ntBASIC13.68□□□□□ -0.22
Scube3Q66PY1 Ly96-201ENSMUST00000026881 632 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Scube3Q66PY1 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC13.68□□□□□ -0.22
Scube3Q66PY1 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Scube3Q66PY1 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Scube3Q66PY1 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Scube3Q66PY1 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms