Protein–RNA interactions for Protein: Q62018

Ctr9, RNA polymerase-associated protein CTR9 homolog, mousemouse

Known RBP Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctr9Q62018 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Ctr9Q62018 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ctr9Q62018 Gm9431-201ENSMUST00000119765 1051 ntBASIC15.28■□□□□ 0.04
Ctr9Q62018 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC15.28■□□□□ 0.04
Ctr9Q62018 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC15.28■□□□□ 0.04
Ctr9Q62018 Gm38158-201ENSMUST00000194617 339 ntBASIC15.28■□□□□ 0.04
Ctr9Q62018 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Ctr9Q62018 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC15.28■□□□□ 0.04
Ctr9Q62018 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Ctr9Q62018 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC15.28■□□□□ 0.04
Ctr9Q62018 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Ctr9Q62018 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Ctr9Q62018 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Ctr9Q62018 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Ctr9Q62018 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ctr9Q62018 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Ctr9Q62018 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ctr9Q62018 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ctr9Q62018 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ctr9Q62018 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC15.28■□□□□ 0.04
Ctr9Q62018 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ctr9Q62018 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ctr9Q62018 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ctr9Q62018 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Ctr9Q62018 Gm9025-201ENSMUST00000122415 1575 ntBASIC15.28■□□□□ 0.04
Ctr9Q62018 AC113060.1-201ENSMUST00000225689 1573 ntBASIC15.28■□□□□ 0.04
Ctr9Q62018 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC15.28■□□□□ 0.04
Ctr9Q62018 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ctr9Q62018 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Ctr9Q62018 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Ctr9Q62018 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC15.27■□□□□ 0.04
Ctr9Q62018 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ctr9Q62018 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ctr9Q62018 Gm15897-201ENSMUST00000117770 1486 ntBASIC15.27■□□□□ 0.04
Ctr9Q62018 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ctr9Q62018 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ctr9Q62018 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ctr9Q62018 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC15.27■□□□□ 0.04
Ctr9Q62018 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Ctr9Q62018 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ctr9Q62018 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ctr9Q62018 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ctr9Q62018 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ctr9Q62018 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Ctr9Q62018 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ctr9Q62018 Gm11793-201ENSMUST00000120433 981 ntBASIC15.27■□□□□ 0.04
Ctr9Q62018 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC15.27■□□□□ 0.04
Ctr9Q62018 Gm27501-201ENSMUST00000183599 107 ntBASIC15.27■□□□□ 0.04
Ctr9Q62018 Mir8109-201ENSMUST00000184375 117 ntBASIC15.27■□□□□ 0.04
Ctr9Q62018 Mir6420-201ENSMUST00000185032 102 ntBASIC15.27■□□□□ 0.04
Ctr9Q62018 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Ctr9Q62018 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Ctr9Q62018 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC15.27■□□□□ 0.04
Ctr9Q62018 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC15.27■□□□□ 0.04
Ctr9Q62018 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
Ctr9Q62018 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ctr9Q62018 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ctr9Q62018 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Ctr9Q62018 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Ctr9Q62018 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
Ctr9Q62018 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Ctr9Q62018 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Ctr9Q62018 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
Ctr9Q62018 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Ctr9Q62018 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Ctr9Q62018 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ctr9Q62018 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Ctr9Q62018 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC15.26■□□□□ 0.03
Ctr9Q62018 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ctr9Q62018 Gm37795-201ENSMUST00000194216 2459 ntBASIC15.26■□□□□ 0.03
Ctr9Q62018 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ctr9Q62018 Gm44401-201ENSMUST00000204462 2375 ntBASIC15.26■□□□□ 0.03
Ctr9Q62018 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ctr9Q62018 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Ctr9Q62018 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Ctr9Q62018 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ctr9Q62018 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ctr9Q62018 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC15.26■□□□□ 0.03
Ctr9Q62018 Gm14704-201ENSMUST00000120300 874 ntBASIC15.26■□□□□ 0.03
Ctr9Q62018 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC15.26■□□□□ 0.03
Ctr9Q62018 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Ctr9Q62018 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ctr9Q62018 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC15.26■□□□□ 0.03
Ctr9Q62018 Gm44772-201ENSMUST00000207623 1191 ntBASIC15.26■□□□□ 0.03
Ctr9Q62018 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ctr9Q62018 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Ctr9Q62018 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ctr9Q62018 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Ctr9Q62018 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Ctr9Q62018 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ctr9Q62018 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ctr9Q62018 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ctr9Q62018 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Ctr9Q62018 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ctr9Q62018 Grk6-205ENSMUST00000224653 2976 ntBASIC15.26■□□□□ 0.03
Ctr9Q62018 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ctr9Q62018 Gm38346-201ENSMUST00000192379 2639 ntBASIC15.26■□□□□ 0.03
Ctr9Q62018 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ctr9Q62018 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ctr9Q62018 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 51.3 ms