Protein–RNA interactions for Protein: Q61572

Foxc1, Forkhead box protein C1, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxc1Q61572 Gm8337-201ENSMUST00000187358 1938 ntBASIC9.74□□□□□ -0.85
Foxc1Q61572 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC9.74□□□□□ -0.85
Foxc1Q61572 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Foxc1Q61572 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Foxc1Q61572 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Foxc1Q61572 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC9.74□□□□□ -0.85
Foxc1Q61572 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Foxc1Q61572 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Foxc1Q61572 Gm16440-201ENSMUST00000100900 1089 ntAPPRIS P1 TSL 5 BASIC9.74□□□□□ -0.85
Foxc1Q61572 Gm5795-201ENSMUST00000100920 984 ntAPPRIS P2 TSL 5 BASIC9.74□□□□□ -0.85
Foxc1Q61572 Gm21103-201ENSMUST00000112737 984 ntAPPRIS ALT2 TSL 5 BASIC9.74□□□□□ -0.85
Foxc1Q61572 Gm15770-201ENSMUST00000117498 584 ntBASIC9.74□□□□□ -0.85
Foxc1Q61572 Cep97-206ENSMUST00000122280 1057 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Foxc1Q61572 Gm8089-201ENSMUST00000122463 968 ntBASIC9.74□□□□□ -0.85
Foxc1Q61572 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Foxc1Q61572 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Foxc1Q61572 Gm3047-201ENSMUST00000164069 822 ntAPPRIS P5 TSL 5 BASIC9.74□□□□□ -0.85
Foxc1Q61572 Gm3029-201ENSMUST00000168306 984 ntAPPRIS P5 TSL 5 BASIC9.74□□□□□ -0.85
Foxc1Q61572 Gm3685-201ENSMUST00000169215 984 ntAPPRIS P5 TSL 5 BASIC9.74□□□□□ -0.85
Foxc1Q61572 Gm7876-201ENSMUST00000169465 984 ntAPPRIS ALT2 TSL 5 BASIC9.74□□□□□ -0.85
Foxc1Q61572 Gm3043-201ENSMUST00000170639 821 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Foxc1Q61572 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC9.74□□□□□ -0.85
Foxc1Q61572 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC9.74□□□□□ -0.85
Foxc1Q61572 Gm9002-201ENSMUST00000178437 499 ntBASIC9.74□□□□□ -0.85
Foxc1Q61572 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Foxc1Q61572 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Foxc1Q61572 Gm28721-201ENSMUST00000187649 918 ntTSL 3 BASIC9.74□□□□□ -0.85
Foxc1Q61572 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC9.74□□□□□ -0.85
Foxc1Q61572 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC9.74□□□□□ -0.85
Foxc1Q61572 Gm19078-201ENSMUST00000206311 727 ntBASIC9.74□□□□□ -0.85
Foxc1Q61572 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC9.74□□□□□ -0.85
Foxc1Q61572 AC131997.1-201ENSMUST00000228611 1229 ntBASIC9.74□□□□□ -0.85
Foxc1Q61572 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Foxc1Q61572 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Foxc1Q61572 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC9.74□□□□□ -0.85
Foxc1Q61572 Olfr510-201ENSMUST00000076289 945 ntAPPRIS P1 BASIC9.74□□□□□ -0.85
Foxc1Q61572 Gm5356-201ENSMUST00000093326 615 ntBASIC9.74□□□□□ -0.85
Foxc1Q61572 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Foxc1Q61572 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC9.74□□□□□ -0.85
Foxc1Q61572 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Foxc1Q61572 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC9.74□□□□□ -0.85
Foxc1Q61572 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Foxc1Q61572 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Foxc1Q61572 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Foxc1Q61572 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Foxc1Q61572 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC9.74□□□□□ -0.85
Foxc1Q61572 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Foxc1Q61572 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Foxc1Q61572 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Foxc1Q61572 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Foxc1Q61572 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Foxc1Q61572 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC9.74□□□□□ -0.85
Foxc1Q61572 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Foxc1Q61572 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC9.74□□□□□ -0.85
Foxc1Q61572 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Foxc1Q61572 Gm20541-201ENSMUST00000173035 1406 ntBASIC9.73□□□□□ -0.85
Foxc1Q61572 Smco1-201ENSMUST00000093183 1408 ntAPPRIS P1 TSL 5 BASIC9.73□□□□□ -0.85
Foxc1Q61572 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC9.73□□□□□ -0.85
Foxc1Q61572 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Foxc1Q61572 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC9.73□□□□□ -0.85
Foxc1Q61572 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Foxc1Q61572 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Foxc1Q61572 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Foxc1Q61572 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Foxc1Q61572 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Foxc1Q61572 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC9.73□□□□□ -0.85
Foxc1Q61572 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC9.73□□□□□ -0.85
Foxc1Q61572 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC9.73□□□□□ -0.85
Foxc1Q61572 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Foxc1Q61572 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Foxc1Q61572 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Foxc1Q61572 Gm43321-201ENSMUST00000198897 2409 ntBASIC9.73□□□□□ -0.85
Foxc1Q61572 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC9.73□□□□□ -0.85
Foxc1Q61572 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Foxc1Q61572 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Foxc1Q61572 Clec12b-201ENSMUST00000032261 1521 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Foxc1Q61572 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Foxc1Q61572 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Foxc1Q61572 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC9.73□□□□□ -0.85
Foxc1Q61572 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Foxc1Q61572 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Foxc1Q61572 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Foxc1Q61572 Gm8131-201ENSMUST00000213783 1570 ntBASIC9.73□□□□□ -0.85
Foxc1Q61572 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC9.73□□□□□ -0.85
Foxc1Q61572 Gm12656-201ENSMUST00000118149 577 ntBASIC9.73□□□□□ -0.85
Foxc1Q61572 Gm12485-201ENSMUST00000119641 291 ntBASIC9.73□□□□□ -0.85
Foxc1Q61572 Gm12341-201ENSMUST00000119724 503 ntBASIC9.73□□□□□ -0.85
Foxc1Q61572 Gm14730-201ENSMUST00000122378 1045 ntBASIC9.73□□□□□ -0.85
Foxc1Q61572 Gm15346-201ENSMUST00000143638 475 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Foxc1Q61572 A230072E10Rik-201ENSMUST00000146161 676 ntTSL 5 BASIC9.73□□□□□ -0.85
Foxc1Q61572 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Foxc1Q61572 Gm8185-201ENSMUST00000160999 669 ntBASIC9.73□□□□□ -0.85
Foxc1Q61572 Gm15680-201ENSMUST00000161597 465 ntTSL 5 BASIC9.73□□□□□ -0.85
Foxc1Q61572 Gm16285-201ENSMUST00000162999 347 ntBASIC9.73□□□□□ -0.85
Foxc1Q61572 Gm27427-201ENSMUST00000185134 193 ntBASIC9.73□□□□□ -0.85
Foxc1Q61572 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Foxc1Q61572 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Foxc1Q61572 Gm7558-201ENSMUST00000193221 1165 ntBASIC9.73□□□□□ -0.85
Foxc1Q61572 4930459L07Rik-201ENSMUST00000199751 420 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Foxc1Q61572 Gm42732-201ENSMUST00000202887 1197 ntBASIC9.73□□□□□ -0.85
Retrieved 100 of 76,532 protein–RNA pairs in 48.8 ms