Protein–RNA interactions for Protein: Q61508

Ecm1, Extracellular matrix protein 1, mousemouse

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ecm1Q61508 Gm28386-201ENSMUST00000189147 1849 ntBASIC14.26□□□□□ -0.13
Ecm1Q61508 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ecm1Q61508 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ecm1Q61508 Gm8798-201ENSMUST00000211877 1661 ntBASIC14.26□□□□□ -0.13
Ecm1Q61508 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ecm1Q61508 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Ecm1Q61508 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ecm1Q61508 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ecm1Q61508 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ecm1Q61508 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ecm1Q61508 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ecm1Q61508 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ecm1Q61508 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ecm1Q61508 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ecm1Q61508 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ecm1Q61508 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ecm1Q61508 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ecm1Q61508 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC14.25□□□□□ -0.13
Ecm1Q61508 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ecm1Q61508 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ecm1Q61508 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC14.25□□□□□ -0.13
Ecm1Q61508 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC14.25□□□□□ -0.13
Ecm1Q61508 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ecm1Q61508 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ecm1Q61508 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ecm1Q61508 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ecm1Q61508 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
Ecm1Q61508 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ecm1Q61508 Gm11331-201ENSMUST00000119764 288 ntBASIC14.25□□□□□ -0.13
Ecm1Q61508 Gm13315-201ENSMUST00000120376 991 ntBASIC14.25□□□□□ -0.13
Ecm1Q61508 Gm12201-201ENSMUST00000120657 1234 ntBASIC14.25□□□□□ -0.13
Ecm1Q61508 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ecm1Q61508 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC14.25□□□□□ -0.13
Ecm1Q61508 Gm32999-201ENSMUST00000192693 562 ntBASIC14.25□□□□□ -0.13
Ecm1Q61508 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ecm1Q61508 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC14.25□□□□□ -0.13
Ecm1Q61508 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC14.25□□□□□ -0.13
Ecm1Q61508 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC14.25□□□□□ -0.13
Ecm1Q61508 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ecm1Q61508 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ecm1Q61508 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC14.25□□□□□ -0.13
Ecm1Q61508 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ecm1Q61508 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC14.25□□□□□ -0.13
Ecm1Q61508 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ecm1Q61508 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ecm1Q61508 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC14.25□□□□□ -0.13
Ecm1Q61508 Gm5884-201ENSMUST00000036712 1479 ntBASIC14.25□□□□□ -0.13
Ecm1Q61508 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ecm1Q61508 Det1-202ENSMUST00000107431 1439 ntTSL 5 BASIC14.24□□□□□ -0.13
Ecm1Q61508 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC14.24□□□□□ -0.13
Ecm1Q61508 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ecm1Q61508 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ecm1Q61508 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ecm1Q61508 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ecm1Q61508 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ecm1Q61508 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
Ecm1Q61508 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC14.24□□□□□ -0.13
Ecm1Q61508 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ecm1Q61508 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC14.24□□□□□ -0.13
Ecm1Q61508 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC14.24□□□□□ -0.13
Ecm1Q61508 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ecm1Q61508 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ecm1Q61508 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ecm1Q61508 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ecm1Q61508 Pla2g1b-202ENSMUST00000112071 361 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ecm1Q61508 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ecm1Q61508 Gm22334-201ENSMUST00000158070 133 ntBASIC14.24□□□□□ -0.13
Ecm1Q61508 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Ecm1Q61508 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ecm1Q61508 Gm27552-201ENSMUST00000183351 62 ntBASIC14.24□□□□□ -0.13
Ecm1Q61508 Gm27844-201ENSMUST00000183613 62 ntBASIC14.24□□□□□ -0.13
Ecm1Q61508 Aprt-ps-201ENSMUST00000212311 505 ntBASIC14.24□□□□□ -0.13
Ecm1Q61508 Gm8959-201ENSMUST00000213150 571 ntBASIC14.24□□□□□ -0.13
Ecm1Q61508 Net1-206ENSMUST00000222504 447 ntTSL 3 BASIC14.24□□□□□ -0.13
Ecm1Q61508 AC125209.1-201ENSMUST00000225812 766 ntBASIC14.24□□□□□ -0.13
Ecm1Q61508 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Ecm1Q61508 Ntan1-201ENSMUST00000023362 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ecm1Q61508 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ecm1Q61508 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Ecm1Q61508 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ecm1Q61508 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ecm1Q61508 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ecm1Q61508 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ecm1Q61508 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ecm1Q61508 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ecm1Q61508 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ecm1Q61508 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ecm1Q61508 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Ecm1Q61508 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ecm1Q61508 Batf2-201ENSMUST00000045042 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ecm1Q61508 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ecm1Q61508 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ecm1Q61508 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC14.23□□□□□ -0.13
Ecm1Q61508 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ecm1Q61508 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ecm1Q61508 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ecm1Q61508 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ecm1Q61508 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ecm1Q61508 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ecm1Q61508 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC14.23□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 42.9 ms