Protein–RNA interactions for Protein: Q60857

Slc6a4, Sodium-dependent serotonin transporter, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a4Q60857 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Slc6a4Q60857 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Slc6a4Q60857 AC137842.1-201ENSMUST00000227896 2064 ntBASIC13.25□□□□□ -0.29
Slc6a4Q60857 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Slc6a4Q60857 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Slc6a4Q60857 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Slc6a4Q60857 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Slc6a4Q60857 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Slc6a4Q60857 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Slc6a4Q60857 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Slc6a4Q60857 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Slc6a4Q60857 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Slc6a4Q60857 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Slc6a4Q60857 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Slc6a4Q60857 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
Slc6a4Q60857 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Slc6a4Q60857 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Slc6a4Q60857 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Slc6a4Q60857 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC13.24□□□□□ -0.29
Slc6a4Q60857 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC13.24□□□□□ -0.29
Slc6a4Q60857 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Slc6a4Q60857 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Slc6a4Q60857 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Slc6a4Q60857 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC13.24□□□□□ -0.29
Slc6a4Q60857 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Slc6a4Q60857 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Slc6a4Q60857 Gm23363-201ENSMUST00000175024 79 ntBASIC13.24□□□□□ -0.29
Slc6a4Q60857 Gm7584-201ENSMUST00000175829 940 ntBASIC13.24□□□□□ -0.29
Slc6a4Q60857 Gm7895-201ENSMUST00000187459 1173 ntBASIC13.24□□□□□ -0.29
Slc6a4Q60857 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC13.24□□□□□ -0.29
Slc6a4Q60857 Gm37489-201ENSMUST00000191883 159 ntBASIC13.24□□□□□ -0.29
Slc6a4Q60857 Gm6621-201ENSMUST00000193251 772 ntBASIC13.24□□□□□ -0.29
Slc6a4Q60857 Gm38319-201ENSMUST00000194537 1266 ntBASIC13.24□□□□□ -0.29
Slc6a4Q60857 Gm43758-201ENSMUST00000199500 367 ntBASIC13.24□□□□□ -0.29
Slc6a4Q60857 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC13.24□□□□□ -0.29
Slc6a4Q60857 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Slc6a4Q60857 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Slc6a4Q60857 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Slc6a4Q60857 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Slc6a4Q60857 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC13.24□□□□□ -0.29
Slc6a4Q60857 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Slc6a4Q60857 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Slc6a4Q60857 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Slc6a4Q60857 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC13.24□□□□□ -0.29
Slc6a4Q60857 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Slc6a4Q60857 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Slc6a4Q60857 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Slc6a4Q60857 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Slc6a4Q60857 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Slc6a4Q60857 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC13.24□□□□□ -0.29
Slc6a4Q60857 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Slc6a4Q60857 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Slc6a4Q60857 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Slc6a4Q60857 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Slc6a4Q60857 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Slc6a4Q60857 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Slc6a4Q60857 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Slc6a4Q60857 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Slc6a4Q60857 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Slc6a4Q60857 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Slc6a4Q60857 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC13.23□□□□□ -0.29
Slc6a4Q60857 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC13.23□□□□□ -0.29
Slc6a4Q60857 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Slc6a4Q60857 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Slc6a4Q60857 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Slc6a4Q60857 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Slc6a4Q60857 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Slc6a4Q60857 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC13.23□□□□□ -0.29
Slc6a4Q60857 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Slc6a4Q60857 Gm4986-201ENSMUST00000119731 549 ntBASIC13.23□□□□□ -0.29
Slc6a4Q60857 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC13.23□□□□□ -0.29
Slc6a4Q60857 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC13.23□□□□□ -0.29
Slc6a4Q60857 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC13.23□□□□□ -0.29
Slc6a4Q60857 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Slc6a4Q60857 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC13.23□□□□□ -0.29
Slc6a4Q60857 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC13.23□□□□□ -0.29
Slc6a4Q60857 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC13.23□□□□□ -0.29
Slc6a4Q60857 Gm2991-201ENSMUST00000173338 480 ntBASIC13.23□□□□□ -0.29
Slc6a4Q60857 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Slc6a4Q60857 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC13.23□□□□□ -0.29
Slc6a4Q60857 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
Slc6a4Q60857 Gm3961-201ENSMUST00000204425 994 ntBASIC13.23□□□□□ -0.29
Slc6a4Q60857 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Slc6a4Q60857 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Slc6a4Q60857 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Slc6a4Q60857 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC13.23□□□□□ -0.29
Slc6a4Q60857 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC13.23□□□□□ -0.29
Slc6a4Q60857 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Slc6a4Q60857 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Slc6a4Q60857 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Slc6a4Q60857 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Slc6a4Q60857 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Slc6a4Q60857 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Slc6a4Q60857 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC13.23□□□□□ -0.29
Slc6a4Q60857 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Slc6a4Q60857 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Slc6a4Q60857 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Slc6a4Q60857 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Slc6a4Q60857 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Slc6a4Q60857 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 53.5 ms