Protein–RNA interactions for Protein: Q5H8C4

Vps13a, Vacuolar protein sorting-associated protein 13A, mousemouse

Predictions only

Length 3,166 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps13aQ5H8C4 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Vps13aQ5H8C4 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Vps13aQ5H8C4 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Vps13aQ5H8C4 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Vps13aQ5H8C4 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Vps13aQ5H8C4 Asgr1-205ENSMUST00000146411 1188 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Vps13aQ5H8C4 Gm15744-201ENSMUST00000161734 213 ntBASIC12.49□□□□□ -0.41
Vps13aQ5H8C4 Mir7677-201ENSMUST00000184226 67 ntBASIC12.49□□□□□ -0.41
Vps13aQ5H8C4 1810026B05Rik-208ENSMUST00000190028 590 ntTSL 3 BASIC12.49□□□□□ -0.41
Vps13aQ5H8C4 Gm18706-201ENSMUST00000210053 1066 ntBASIC12.49□□□□□ -0.41
Vps13aQ5H8C4 Gm45856-201ENSMUST00000212752 416 ntBASIC12.49□□□□□ -0.41
Vps13aQ5H8C4 AC122408.1-201ENSMUST00000218949 218 ntBASIC12.49□□□□□ -0.41
Vps13aQ5H8C4 AC155712.2-201ENSMUST00000220398 643 ntTSL 3 BASIC12.49□□□□□ -0.41
Vps13aQ5H8C4 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC12.49□□□□□ -0.41
Vps13aQ5H8C4 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Vps13aQ5H8C4 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Vps13aQ5H8C4 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Vps13aQ5H8C4 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Vps13aQ5H8C4 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Vps13aQ5H8C4 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Vps13aQ5H8C4 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Vps13aQ5H8C4 Gm9072-201ENSMUST00000218390 1514 ntBASIC12.49□□□□□ -0.41
Vps13aQ5H8C4 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC12.49□□□□□ -0.41
Vps13aQ5H8C4 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Vps13aQ5H8C4 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC12.49□□□□□ -0.41
Vps13aQ5H8C4 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Vps13aQ5H8C4 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Vps13aQ5H8C4 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC12.49□□□□□ -0.41
Vps13aQ5H8C4 Dpf3-206ENSMUST00000177959 1298 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Vps13aQ5H8C4 Gm37695-201ENSMUST00000191765 530 ntTSL 5 BASIC12.49□□□□□ -0.41
Vps13aQ5H8C4 Crcp-204ENSMUST00000202163 931 ntTSL 2 BASIC12.49□□□□□ -0.41
Vps13aQ5H8C4 CT025553.1-201ENSMUST00000226292 299 ntBASIC12.49□□□□□ -0.41
Vps13aQ5H8C4 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Vps13aQ5H8C4 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Vps13aQ5H8C4 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Vps13aQ5H8C4 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Vps13aQ5H8C4 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Vps13aQ5H8C4 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Vps13aQ5H8C4 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Vps13aQ5H8C4 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Vps13aQ5H8C4 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Vps13aQ5H8C4 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Vps13aQ5H8C4 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Vps13aQ5H8C4 Themis3-201ENSMUST00000024914 1797 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Vps13aQ5H8C4 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC12.48□□□□□ -0.41
Vps13aQ5H8C4 Ifitm10-203ENSMUST00000105988 824 ntAPPRIS P4 TSL 2 BASIC12.48□□□□□ -0.41
Vps13aQ5H8C4 Dnmt3bos-201ENSMUST00000124988 718 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Vps13aQ5H8C4 Gm36074-201ENSMUST00000221383 591 ntTSL 5 BASIC12.48□□□□□ -0.41
Vps13aQ5H8C4 Tbca-201ENSMUST00000046644 559 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Vps13aQ5H8C4 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC12.48□□□□□ -0.41
Vps13aQ5H8C4 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Vps13aQ5H8C4 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Vps13aQ5H8C4 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Vps13aQ5H8C4 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Vps13aQ5H8C4 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Vps13aQ5H8C4 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Vps13aQ5H8C4 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Vps13aQ5H8C4 Ighv7-2-201ENSMUST00000103462 354 ntAPPRIS ALT2 BASIC12.48□□□□□ -0.41
Vps13aQ5H8C4 Gm26013-201ENSMUST00000104404 119 ntBASIC12.48□□□□□ -0.41
Vps13aQ5H8C4 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Vps13aQ5H8C4 Gm16001-201ENSMUST00000127989 875 ntTSL 3 BASIC12.48□□□□□ -0.41
Vps13aQ5H8C4 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC12.48□□□□□ -0.41
Vps13aQ5H8C4 Gm17798-201ENSMUST00000182282 1035 ntBASIC12.48□□□□□ -0.41
Vps13aQ5H8C4 Gm3332-201ENSMUST00000189337 928 ntBASIC12.48□□□□□ -0.41
Vps13aQ5H8C4 Gm4157-201ENSMUST00000211647 679 ntBASIC12.48□□□□□ -0.41
Vps13aQ5H8C4 Krtap4-2-201ENSMUST00000058987 974 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Vps13aQ5H8C4 Commd4-201ENSMUST00000065358 858 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Vps13aQ5H8C4 Acot13-201ENSMUST00000006900 721 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Vps13aQ5H8C4 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC12.48□□□□□ -0.41
Vps13aQ5H8C4 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Vps13aQ5H8C4 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Vps13aQ5H8C4 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Vps13aQ5H8C4 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Vps13aQ5H8C4 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Vps13aQ5H8C4 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Vps13aQ5H8C4 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Vps13aQ5H8C4 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Vps13aQ5H8C4 Gm14154-201ENSMUST00000142642 579 ntTSL 3 BASIC12.47□□□□□ -0.41
Vps13aQ5H8C4 Cd63-ps-202ENSMUST00000154992 717 ntBASIC12.47□□□□□ -0.41
Vps13aQ5H8C4 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC12.47□□□□□ -0.41
Vps13aQ5H8C4 Psmg2-201ENSMUST00000025418 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Vps13aQ5H8C4 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Vps13aQ5H8C4 Gm4744-201ENSMUST00000073642 792 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Vps13aQ5H8C4 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC12.47□□□□□ -0.41
Vps13aQ5H8C4 Gm26513-201ENSMUST00000181802 2489 ntBASIC12.47□□□□□ -0.41
Vps13aQ5H8C4 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Vps13aQ5H8C4 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Vps13aQ5H8C4 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC12.47□□□□□ -0.41
Vps13aQ5H8C4 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Vps13aQ5H8C4 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Vps13aQ5H8C4 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Vps13aQ5H8C4 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Vps13aQ5H8C4 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Vps13aQ5H8C4 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC12.47□□□□□ -0.41
Vps13aQ5H8C4 Gm15003-201ENSMUST00000118884 446 ntBASIC12.47□□□□□ -0.41
Vps13aQ5H8C4 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC12.47□□□□□ -0.41
Vps13aQ5H8C4 9930004E17Rik-201ENSMUST00000180031 498 ntBASIC12.47□□□□□ -0.41
Vps13aQ5H8C4 Gm27910-201ENSMUST00000185004 107 ntBASIC12.47□□□□□ -0.41
Vps13aQ5H8C4 AI839979-201ENSMUST00000200738 654 ntTSL 2 BASIC12.47□□□□□ -0.41
Vps13aQ5H8C4 Gm34655-202ENSMUST00000215259 877 ntTSL 3 BASIC12.47□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 65.8 ms