Protein–RNA interactions for Protein: Q5DTM8

Rnf20, E3 ubiquitin-protein ligase BRE1A, mousemouse

Predictions only

Length 973 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf20Q5DTM8 Gm42863-201ENSMUST00000197875 2958 ntBASIC15.43■□□□□ 0.06
Rnf20Q5DTM8 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Rnf20Q5DTM8 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Rnf20Q5DTM8 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Rnf20Q5DTM8 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Rnf20Q5DTM8 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Rnf20Q5DTM8 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Rnf20Q5DTM8 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Rnf20Q5DTM8 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Rnf20Q5DTM8 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC15.43■□□□□ 0.06
Rnf20Q5DTM8 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Rnf20Q5DTM8 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC15.43■□□□□ 0.06
Rnf20Q5DTM8 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Rnf20Q5DTM8 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Rnf20Q5DTM8 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Rnf20Q5DTM8 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Rnf20Q5DTM8 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Rnf20Q5DTM8 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Rnf20Q5DTM8 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Rnf20Q5DTM8 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC15.42■□□□□ 0.06
Rnf20Q5DTM8 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Rnf20Q5DTM8 Gm45684-201ENSMUST00000210244 1571 ntBASIC15.42■□□□□ 0.06
Rnf20Q5DTM8 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Rnf20Q5DTM8 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Rnf20Q5DTM8 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
Rnf20Q5DTM8 Gm45059-201ENSMUST00000205558 1077 ntBASIC15.42■□□□□ 0.06
Rnf20Q5DTM8 AC154305.4-201ENSMUST00000224520 614 ntBASIC15.42■□□□□ 0.06
Rnf20Q5DTM8 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Rnf20Q5DTM8 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Rnf20Q5DTM8 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Rnf20Q5DTM8 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Rnf20Q5DTM8 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Rnf20Q5DTM8 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Rnf20Q5DTM8 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Rnf20Q5DTM8 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Rnf20Q5DTM8 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Rnf20Q5DTM8 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Rnf20Q5DTM8 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
Rnf20Q5DTM8 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Rnf20Q5DTM8 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Rnf20Q5DTM8 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Rnf20Q5DTM8 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Rnf20Q5DTM8 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rnf20Q5DTM8 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rnf20Q5DTM8 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rnf20Q5DTM8 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC15.41■□□□□ 0.06
Rnf20Q5DTM8 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rnf20Q5DTM8 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rnf20Q5DTM8 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rnf20Q5DTM8 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Rnf20Q5DTM8 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rnf20Q5DTM8 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rnf20Q5DTM8 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Rnf20Q5DTM8 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC15.41■□□□□ 0.06
Rnf20Q5DTM8 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC15.41■□□□□ 0.06
Rnf20Q5DTM8 Gm11814-201ENSMUST00000119515 929 ntBASIC15.41■□□□□ 0.06
Rnf20Q5DTM8 Gm11803-201ENSMUST00000119966 444 ntBASIC15.41■□□□□ 0.06
Rnf20Q5DTM8 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Rnf20Q5DTM8 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC15.41■□□□□ 0.06
Rnf20Q5DTM8 Arhgef33-209ENSMUST00000225223 714 ntBASIC15.41■□□□□ 0.06
Rnf20Q5DTM8 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rnf20Q5DTM8 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC15.41■□□□□ 0.06
Rnf20Q5DTM8 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rnf20Q5DTM8 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Rnf20Q5DTM8 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Rnf20Q5DTM8 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rnf20Q5DTM8 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rnf20Q5DTM8 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rnf20Q5DTM8 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rnf20Q5DTM8 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC15.41■□□□□ 0.06
Rnf20Q5DTM8 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rnf20Q5DTM8 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rnf20Q5DTM8 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rnf20Q5DTM8 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Rnf20Q5DTM8 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rnf20Q5DTM8 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rnf20Q5DTM8 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rnf20Q5DTM8 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rnf20Q5DTM8 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rnf20Q5DTM8 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Rnf20Q5DTM8 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC15.4■□□□□ 0.06
Rnf20Q5DTM8 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Rnf20Q5DTM8 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Rnf20Q5DTM8 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Rnf20Q5DTM8 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC15.4■□□□□ 0.06
Rnf20Q5DTM8 Gm13123-201ENSMUST00000122173 492 ntBASIC15.4■□□□□ 0.06
Rnf20Q5DTM8 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rnf20Q5DTM8 Gm8810-201ENSMUST00000172895 754 ntBASIC15.4■□□□□ 0.06
Rnf20Q5DTM8 Gm27486-201ENSMUST00000184923 80 ntBASIC15.4■□□□□ 0.06
Rnf20Q5DTM8 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rnf20Q5DTM8 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rnf20Q5DTM8 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Rnf20Q5DTM8 Gm10012-201ENSMUST00000078252 192 ntBASIC15.4■□□□□ 0.06
Rnf20Q5DTM8 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rnf20Q5DTM8 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Rnf20Q5DTM8 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rnf20Q5DTM8 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rnf20Q5DTM8 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rnf20Q5DTM8 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rnf20Q5DTM8 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 93.9 ms