Protein–RNA interactions for Protein: Q4FZF3

Ddx49, Probable ATP-dependent RNA helicase DDX49, mousemouse

Known RBP Predictions only

Length 480 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx49Q4FZF3 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ddx49Q4FZF3 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Ddx49Q4FZF3 Gm11930-201ENSMUST00000117788 190 ntBASIC15.09■□□□□ 0.01
Ddx49Q4FZF3 Gm13665-201ENSMUST00000120830 528 ntBASIC15.09■□□□□ 0.01
Ddx49Q4FZF3 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Ddx49Q4FZF3 Gm25732-201ENSMUST00000175168 60 ntBASIC15.09■□□□□ 0.01
Ddx49Q4FZF3 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC15.09■□□□□ 0.01
Ddx49Q4FZF3 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC15.09■□□□□ 0.01
Ddx49Q4FZF3 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Ddx49Q4FZF3 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ddx49Q4FZF3 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Ddx49Q4FZF3 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ddx49Q4FZF3 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC15.09■□□□□ 0.01
Ddx49Q4FZF3 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
Ddx49Q4FZF3 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ddx49Q4FZF3 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Ddx49Q4FZF3 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ddx49Q4FZF3 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC15.09■□□□□ 0.01
Ddx49Q4FZF3 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC15.09■□□□□ 0.01
Ddx49Q4FZF3 AC101945.2-201ENSMUST00000227886 1377 ntBASIC15.09■□□□□ 0.01
Ddx49Q4FZF3 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Ddx49Q4FZF3 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ddx49Q4FZF3 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ddx49Q4FZF3 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC15.09■□□□□ 0.01
Ddx49Q4FZF3 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ddx49Q4FZF3 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0.01
Ddx49Q4FZF3 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC15.08■□□□□ 0.01
Ddx49Q4FZF3 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Ddx49Q4FZF3 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0
Ddx49Q4FZF3 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Ddx49Q4FZF3 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC15.08■□□□□ 0
Ddx49Q4FZF3 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Ddx49Q4FZF3 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC15.08■□□□□ 0
Ddx49Q4FZF3 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Ddx49Q4FZF3 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC15.08■□□□□ 0
Ddx49Q4FZF3 Cd27-203ENSMUST00000112282 588 ntTSL 1 (best) BASIC15.08■□□□□ 0
Ddx49Q4FZF3 Gm4760-201ENSMUST00000119663 1030 ntBASIC15.08■□□□□ 0
Ddx49Q4FZF3 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Ddx49Q4FZF3 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC15.08■□□□□ 0
Ddx49Q4FZF3 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC15.08■□□□□ 0
Ddx49Q4FZF3 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC15.08■□□□□ 0
Ddx49Q4FZF3 Gm9004-201ENSMUST00000218739 1222 ntBASIC15.08■□□□□ 0
Ddx49Q4FZF3 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Ddx49Q4FZF3 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Ddx49Q4FZF3 Gm42769-201ENSMUST00000198576 1659 ntBASIC15.08■□□□□ 0
Ddx49Q4FZF3 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC15.08■□□□□ 0
Ddx49Q4FZF3 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Ddx49Q4FZF3 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Ddx49Q4FZF3 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Ddx49Q4FZF3 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC15.08■□□□□ 0
Ddx49Q4FZF3 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Ddx49Q4FZF3 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Ddx49Q4FZF3 Cyp4f16-208ENSMUST00000169591 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Ddx49Q4FZF3 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Ddx49Q4FZF3 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Ddx49Q4FZF3 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Ddx49Q4FZF3 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ddx49Q4FZF3 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC15.07■□□□□ 0
Ddx49Q4FZF3 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Ddx49Q4FZF3 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ddx49Q4FZF3 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC15.07■□□□□ 0
Ddx49Q4FZF3 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Ddx49Q4FZF3 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC15.07■□□□□ 0
Ddx49Q4FZF3 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Ddx49Q4FZF3 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC15.07■□□□□ 0
Ddx49Q4FZF3 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC15.07■□□□□ 0
Ddx49Q4FZF3 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Ddx49Q4FZF3 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ddx49Q4FZF3 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC15.07■□□□□ 0
Ddx49Q4FZF3 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC15.07■□□□□ 0
Ddx49Q4FZF3 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ddx49Q4FZF3 Olfr647-ps1-201ENSMUST00000121599 960 ntBASIC15.07■□□□□ 0
Ddx49Q4FZF3 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ddx49Q4FZF3 Gm5597-201ENSMUST00000182353 1193 ntBASIC15.07■□□□□ 0
Ddx49Q4FZF3 Gm29264-201ENSMUST00000191240 1264 ntTSL 1 (best) BASIC15.07■□□□□ 0
Ddx49Q4FZF3 Gm44262-201ENSMUST00000204969 372 ntBASIC15.07■□□□□ 0
Ddx49Q4FZF3 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC15.07■□□□□ 0
Ddx49Q4FZF3 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC15.07■□□□□ 0
Ddx49Q4FZF3 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC15.07■□□□□ 0
Ddx49Q4FZF3 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC15.07■□□□□ 0
Ddx49Q4FZF3 Gm8959-201ENSMUST00000213150 571 ntBASIC15.07■□□□□ 0
Ddx49Q4FZF3 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC15.07■□□□□ 0
Ddx49Q4FZF3 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC15.07■□□□□ 0
Ddx49Q4FZF3 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ddx49Q4FZF3 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ddx49Q4FZF3 Crry-ps-201ENSMUST00000079090 1309 ntBASIC15.07■□□□□ 0
Ddx49Q4FZF3 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Ddx49Q4FZF3 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ddx49Q4FZF3 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Ddx49Q4FZF3 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Ddx49Q4FZF3 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Ddx49Q4FZF3 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ddx49Q4FZF3 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Ddx49Q4FZF3 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ddx49Q4FZF3 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ddx49Q4FZF3 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Ddx49Q4FZF3 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ddx49Q4FZF3 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC15.07■□□□□ 0
Ddx49Q4FZF3 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ddx49Q4FZF3 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms