Protein–RNA interactions for Protein: Q4FK66

Prpf38a, Pre-mRNA-splicing factor 38A, mousemouse

Known RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38aQ4FK66 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Prpf38aQ4FK66 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Prpf38aQ4FK66 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Prpf38aQ4FK66 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Prpf38aQ4FK66 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Prpf38aQ4FK66 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Prpf38aQ4FK66 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Prpf38aQ4FK66 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Prpf38aQ4FK66 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Prpf38aQ4FK66 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC15.11■□□□□ 0.01
Prpf38aQ4FK66 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Prpf38aQ4FK66 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Prpf38aQ4FK66 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Prpf38aQ4FK66 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
Prpf38aQ4FK66 Gm6992-201ENSMUST00000217973 1607 ntBASIC15.11■□□□□ 0.01
Prpf38aQ4FK66 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Prpf38aQ4FK66 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Prpf38aQ4FK66 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC15.11■□□□□ 0.01
Prpf38aQ4FK66 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC15.11■□□□□ 0.01
Prpf38aQ4FK66 Gm11964-201ENSMUST00000120982 444 ntBASIC15.11■□□□□ 0.01
Prpf38aQ4FK66 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC15.11■□□□□ 0.01
Prpf38aQ4FK66 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Prpf38aQ4FK66 CT009713.10-202ENSMUST00000225734 696 ntBASIC15.11■□□□□ 0.01
Prpf38aQ4FK66 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Prpf38aQ4FK66 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Prpf38aQ4FK66 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Prpf38aQ4FK66 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Prpf38aQ4FK66 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC15.11■□□□□ 0.01
Prpf38aQ4FK66 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Prpf38aQ4FK66 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Prpf38aQ4FK66 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Prpf38aQ4FK66 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Prpf38aQ4FK66 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC15.11■□□□□ 0.01
Prpf38aQ4FK66 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Prpf38aQ4FK66 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Prpf38aQ4FK66 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC15.11■□□□□ 0.01
Prpf38aQ4FK66 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Prpf38aQ4FK66 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Prpf38aQ4FK66 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Prpf38aQ4FK66 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Prpf38aQ4FK66 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Prpf38aQ4FK66 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Prpf38aQ4FK66 Gm8798-201ENSMUST00000211877 1661 ntBASIC15.1■□□□□ 0.01
Prpf38aQ4FK66 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC15.1■□□□□ 0.01
Prpf38aQ4FK66 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Prpf38aQ4FK66 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Prpf38aQ4FK66 Daam2-202ENSMUST00000224595 1926 ntBASIC15.1■□□□□ 0.01
Prpf38aQ4FK66 Gm14921-201ENSMUST00000118643 908 ntBASIC15.1■□□□□ 0.01
Prpf38aQ4FK66 Gm11222-201ENSMUST00000119005 738 ntBASIC15.1■□□□□ 0.01
Prpf38aQ4FK66 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Prpf38aQ4FK66 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Prpf38aQ4FK66 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC15.1■□□□□ 0.01
Prpf38aQ4FK66 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC15.1■□□□□ 0.01
Prpf38aQ4FK66 Gm27243-201ENSMUST00000183964 521 ntBASIC15.1■□□□□ 0.01
Prpf38aQ4FK66 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC15.1■□□□□ 0.01
Prpf38aQ4FK66 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Prpf38aQ4FK66 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Prpf38aQ4FK66 Rassf8-202ENSMUST00000058538 1131 ntBASIC15.1■□□□□ 0.01
Prpf38aQ4FK66 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Prpf38aQ4FK66 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Prpf38aQ4FK66 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Prpf38aQ4FK66 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Prpf38aQ4FK66 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Prpf38aQ4FK66 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Prpf38aQ4FK66 Matn2-206ENSMUST00000228570 2798 ntBASIC15.1■□□□□ 0.01
Prpf38aQ4FK66 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Prpf38aQ4FK66 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Prpf38aQ4FK66 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Prpf38aQ4FK66 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Prpf38aQ4FK66 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Prpf38aQ4FK66 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Prpf38aQ4FK66 CT030684.3-201ENSMUST00000227308 2445 ntBASIC15.09■□□□□ 0.01
Prpf38aQ4FK66 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Prpf38aQ4FK66 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Prpf38aQ4FK66 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC15.09■□□□□ 0.01
Prpf38aQ4FK66 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Prpf38aQ4FK66 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Prpf38aQ4FK66 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Prpf38aQ4FK66 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Prpf38aQ4FK66 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Prpf38aQ4FK66 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Prpf38aQ4FK66 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Prpf38aQ4FK66 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Prpf38aQ4FK66 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Prpf38aQ4FK66 Gm13492-201ENSMUST00000119772 665 ntBASIC15.09■□□□□ 0.01
Prpf38aQ4FK66 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Prpf38aQ4FK66 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Prpf38aQ4FK66 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Prpf38aQ4FK66 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Prpf38aQ4FK66 Gm19963-201ENSMUST00000208413 1255 ntBASIC15.09■□□□□ 0.01
Prpf38aQ4FK66 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Prpf38aQ4FK66 Mir339-201ENSMUST00000083659 96 ntBASIC15.09■□□□□ 0.01
Prpf38aQ4FK66 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC15.09■□□□□ 0.01
Prpf38aQ4FK66 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Prpf38aQ4FK66 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Prpf38aQ4FK66 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Prpf38aQ4FK66 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Prpf38aQ4FK66 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Prpf38aQ4FK66 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Prpf38aQ4FK66 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 51 ms