Protein–RNA interactions for Protein: Q4ACU6

Shank3, SH3 and multiple ankyrin repeat domains protein 3, mousemouse

Predictions only

Length 1,730 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank3Q4ACU6 Cbx3-ps8-201ENSMUST00000214564 548 ntBASIC15.71■□□□□ 0.1
Shank3Q4ACU6 CT571245.2-201ENSMUST00000218421 305 ntBASIC15.71■□□□□ 0.1
Shank3Q4ACU6 AC154290.1-201ENSMUST00000223786 1240 ntBASIC15.71■□□□□ 0.1
Shank3Q4ACU6 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
Shank3Q4ACU6 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Shank3Q4ACU6 Snora73b-201ENSMUST00000083419 205 ntBASIC15.71■□□□□ 0.1
Shank3Q4ACU6 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC15.71■□□□□ 0.1
Shank3Q4ACU6 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Shank3Q4ACU6 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC15.7■□□□□ 0.1
Shank3Q4ACU6 Myo3b-202ENSMUST00000112241 1319 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Shank3Q4ACU6 Olfr520-202ENSMUST00000220185 1330 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Shank3Q4ACU6 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Shank3Q4ACU6 Gm42840-201ENSMUST00000200303 2251 ntBASIC15.7■□□□□ 0.1
Shank3Q4ACU6 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC15.7■□□□□ 0.1
Shank3Q4ACU6 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Shank3Q4ACU6 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Shank3Q4ACU6 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Shank3Q4ACU6 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Shank3Q4ACU6 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Shank3Q4ACU6 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Shank3Q4ACU6 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Shank3Q4ACU6 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Shank3Q4ACU6 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Shank3Q4ACU6 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Shank3Q4ACU6 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Shank3Q4ACU6 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Shank3Q4ACU6 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Shank3Q4ACU6 Gm14760-201ENSMUST00000121831 999 ntBASIC15.7■□□□□ 0.1
Shank3Q4ACU6 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC15.7■□□□□ 0.1
Shank3Q4ACU6 Ager-207ENSMUST00000173992 1248 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Shank3Q4ACU6 Rpl31-202ENSMUST00000178079 487 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
Shank3Q4ACU6 Mir7677-201ENSMUST00000184226 67 ntBASIC15.7■□□□□ 0.1
Shank3Q4ACU6 Gm18974-201ENSMUST00000221478 1031 ntBASIC15.7■□□□□ 0.1
Shank3Q4ACU6 Snu13-202ENSMUST00000080622 1283 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Shank3Q4ACU6 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Shank3Q4ACU6 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC15.7■□□□□ 0.1
Shank3Q4ACU6 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Shank3Q4ACU6 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Shank3Q4ACU6 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Shank3Q4ACU6 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Shank3Q4ACU6 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC15.69■□□□□ 0.1
Shank3Q4ACU6 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Shank3Q4ACU6 Ighv10-1-201ENSMUST00000103492 359 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Shank3Q4ACU6 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC15.69■□□□□ 0.1
Shank3Q4ACU6 Isl1-202ENSMUST00000176044 1198 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Shank3Q4ACU6 9930004E17Rik-201ENSMUST00000180031 498 ntBASIC15.69■□□□□ 0.1
Shank3Q4ACU6 Gm34023-201ENSMUST00000195539 217 ntBASIC15.69■□□□□ 0.1
Shank3Q4ACU6 Gm44593-201ENSMUST00000208372 1249 ntTSL 5 BASIC15.69■□□□□ 0.1
Shank3Q4ACU6 Gm2517-201ENSMUST00000215651 348 ntBASIC15.69■□□□□ 0.1
Shank3Q4ACU6 Olfr354-201ENSMUST00000068475 1084 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Shank3Q4ACU6 Orc4-202ENSMUST00000090976 1153 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Shank3Q4ACU6 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Shank3Q4ACU6 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Shank3Q4ACU6 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Shank3Q4ACU6 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Shank3Q4ACU6 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Shank3Q4ACU6 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Shank3Q4ACU6 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Shank3Q4ACU6 Hsd3b4-201ENSMUST00000179429 1575 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
Shank3Q4ACU6 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
Shank3Q4ACU6 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC15.69■□□□□ 0.1
Shank3Q4ACU6 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Shank3Q4ACU6 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Shank3Q4ACU6 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC15.69■□□□□ 0.1
Shank3Q4ACU6 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Shank3Q4ACU6 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Shank3Q4ACU6 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Shank3Q4ACU6 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Shank3Q4ACU6 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Shank3Q4ACU6 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Shank3Q4ACU6 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Shank3Q4ACU6 E330023G01Rik-201ENSMUST00000186387 1483 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Shank3Q4ACU6 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
Shank3Q4ACU6 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Shank3Q4ACU6 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Shank3Q4ACU6 Rdh9-203ENSMUST00000136223 1276 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Shank3Q4ACU6 Tlx1-202ENSMUST00000174617 806 ntTSL 5 BASIC15.68■□□□□ 0.1
Shank3Q4ACU6 Smco2-201ENSMUST00000032433 1276 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Shank3Q4ACU6 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Shank3Q4ACU6 Gm37795-201ENSMUST00000194216 2459 ntBASIC15.68■□□□□ 0.1
Shank3Q4ACU6 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Shank3Q4ACU6 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Shank3Q4ACU6 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Shank3Q4ACU6 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Shank3Q4ACU6 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Shank3Q4ACU6 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Shank3Q4ACU6 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC15.68■□□□□ 0.1
Shank3Q4ACU6 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC15.68■□□□□ 0.1
Shank3Q4ACU6 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Shank3Q4ACU6 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC15.68■□□□□ 0.1
Shank3Q4ACU6 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
Shank3Q4ACU6 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Shank3Q4ACU6 Rprl1-201ENSMUST00000158050 327 ntBASIC15.68■□□□□ 0.1
Shank3Q4ACU6 Gm3671-201ENSMUST00000182463 1007 ntBASIC15.68■□□□□ 0.1
Shank3Q4ACU6 Gm10550-201ENSMUST00000188846 982 ntTSL 2 BASIC15.68■□□□□ 0.1
Shank3Q4ACU6 Gm18304-201ENSMUST00000189162 546 ntBASIC15.68■□□□□ 0.1
Shank3Q4ACU6 Gm43184-201ENSMUST00000197247 542 ntBASIC15.68■□□□□ 0.1
Shank3Q4ACU6 Gm17831-201ENSMUST00000205579 900 ntBASIC15.68■□□□□ 0.1
Shank3Q4ACU6 Ddo-207ENSMUST00000216830 806 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Shank3Q4ACU6 Gm40709-203ENSMUST00000219695 973 ntTSL 5 BASIC15.68■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms